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Report for CCDS59226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59226.1 Public Homo sapiens 11 MDK 24 110 108 CCDS HistoryNCBI Gene:4192Re-query CCDS DB by CCDS ID:59226.1Re-query CCDS DB by GeneID:4192See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 12, NCBI annotation release 104, Ensembl annotation release 71

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59226.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395569.8 ENSP00000378936.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395569.8Link to Ensembl Protein Viewer:ENSP00000378936.4Re-query CCDS DB by Nucleotide ID:ENST00000395569Re-query CCDS DB by Protein ID:ENSP00000378936
Original member Current member NCBI NM_001270552.3 NP_001257481.1 Accepted alive Link to Nucleotide Sequence:NM_001270552.3Link to Protein Sequence:NP_001257481.1Re-query CCDS DB by Nucleotide ID:NM_001270552Re-query CCDS DB by Protein ID:NP_001257481Link to BLAST:NP_001257481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001257481.1 87 P21741-2 87 100% 0 0

Chromosomal Locations for CCDS 59226.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 46382058 46382133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46382587 46382748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 46383469 46383494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (264 nt):
ATGCAGCACCGAGGCTTCCTCCTCCTCACCCTCCTCGCCCTGCTGGCGCTCACCTCCGCGGTCGCCAAAA
AGAAAGCCGACTGCAAGTACAAGTTTGAGAACTGGGGTGCGTGTGATGGGGGCACAGGCACCAAAGTCCG
CCAAGGCACCCTGAAGAAGGCGCGCTACAATGCTCAGTGCCAGGAGACCATCCGCGTCACCAAGCCCTGC
ACCCCCAAGACCAAAGCAAAGGCCAAAGCCAAGAAAGGGAAGGGAAAGGACTAG

Translation (87 aa):
MQHRGFLLLTLLALLALTSAVAKKKADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETIRVTKPC
TPKTKAKAKAKKGKGKD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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