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Report for CCDS41530.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41530.1 Public Homo sapiens 10 TMEM26 24 110 108 CCDS HistoryNCBI Gene:219623Re-query CCDS DB by CCDS ID:41530.1Re-query CCDS DB by GeneID:219623See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41530.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399298.8 ENSP00000382237.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000399298.8Link to Ensembl Protein Viewer:ENSP00000382237.3Re-query CCDS DB by Nucleotide ID:ENST00000399298Re-query CCDS DB by Protein ID:ENSP00000382237
Original member Current member EBI ENST00000503886.5 ENSP00000425286.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000503886.5Link to Ensembl Protein Viewer:ENSP00000425286.1Re-query CCDS DB by Nucleotide ID:ENST00000503886Re-query CCDS DB by Protein ID:ENSP00000425286
Original member Current member NCBI NM_178505.8 NP_848600.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_178505.8Link to Protein Sequence:NP_848600.2Re-query CCDS DB by Nucleotide ID:NM_178505Re-query CCDS DB by Protein ID:NP_848600Link to BLAST:NP_848600.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_848600.2 368 Q6ZUK4-1 368 100% 0 0

Chromosomal Locations for CCDS 41530.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 61410322 61410746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61413459 61413535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61428926 61429146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61431219 61431332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61436170 61436248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61452891 61453081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1107 nt):
ATGGAGGGACTGGTCTTCCTTAACGCCCTGGCCACTCGGTTGCTGTTCCTGCTGCACTCGCTGGTCGGGG
TCTGGCGAGTGACCGAGGTGAAGAAGGAGCCGCGGTACTGGCTGCTTGCGCTGCTCAACCTCTTGCTCTT
CCTGGAGACTGCGCTCACCCTCAAGTTCAAGCGCGGCAGAGGCTACAAATGGTTTTCACCAGCCATATTT
TTATATCTGATTAGCATCGTTCCATCATTATGGCTTCTTGAATTGCACCATGAGACCCAGTATTGCAGTA
TCCAGGCTGAAGGAACATCACAGAATACCAGCAGAAAAGAAGACTTCAATCAAACATTGACATCCAATGA
ACAAACCAGTAGAGCTGATGATCTCATTGAGACGGCCAAAGTTTTTGTGAATAACTTATCTACAGTATGT
GAGAAAGTTTGGACATTGGGACTCCATCAGACATTCCTGTTAATGCTAATAATTGGAAGATGGCTTCTAC
CCATTGGAGGCGGGATCACTCGAGATCAACTCTCTCAACTTCTTCTTATGTTTGTGGGGACAGCGGCTGA
CATACTGGAATTCACAAGTGAGACCCTAGAAGAACAAAATGTGAGGAATAGTCCTGCACTAGTCTATGCC
ATCCTTGTTATATGGACTTGGAGCATGCTGCAGTTTCCACTTGACCTGGCAGTACAGAACGTTGTGTGCC
CTGTGTCTGTGACAGAGAGGGGATTCCCCAGCCTGTTCTTTTGCCAGTACAGTGCCGATCTGTGGAACAT
CGGAATCAGCGTCTTCATACAAGATGGCCCCTTCCTTGTCGTGCGTCTCATACTGATGACCTATTTCAAA
GTGATCAATCAGATGCTGGTGTTCTTTGCCGCGAAGAACTTCCTCGTGGTGGTGTTGCAACTCTACCGCT
TGGTGGTGCTGGCATTGGCAGTCCGTGCTTCGTTGAGAAGTCAGTCAGAAGGCCTGAAAGGAGAACATGG
TTGCCGGGCACAGACCTCTGAGAGTGGGCCCTCTCAGCGGGACTGGCAGAACGAGTCTAAGGAGGGCCTG
GCTATTCCTTTGCGGGGCTCCCCAGTCACCTCCGACGACTCCCACCACACCCCTTAG

Translation (368 aa):
MEGLVFLNALATRLLFLLHSLVGVWRVTEVKKEPRYWLLALLNLLLFLETALTLKFKRGRGYKWFSPAIF
LYLISIVPSLWLLELHHETQYCSIQAEGTSQNTSRKEDFNQTLTSNEQTSRADDLIETAKVFVNNLSTVC
EKVWTLGLHQTFLLMLIIGRWLLPIGGGITRDQLSQLLLMFVGTAADILEFTSETLEEQNVRNSPALVYA
ILVIWTWSMLQFPLDLAVQNVVCPVSVTERGFPSLFFCQYSADLWNIGISVFIQDGPFLVVRLILMTYFK
VINQMLVFFAAKNFLVVVLQLYRLVVLALAVRASLRSQSEGLKGEHGCRAQTSESGPSQRDWQNESKEGL
AIPLRGSPVTSDDSHHTP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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