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Report for CCDS87264.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
87264.1 Public Homo sapiens 4 GYPB 24 110 108 CCDS HistoryNCBI Gene:2994Re-query CCDS DB by CCDS ID:87264.1Re-query CCDS DB by GeneID:2994See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 87264.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000506516.6 ENSP00000424025.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506516.6Link to Ensembl Protein Viewer:ENSP00000424025.2Re-query CCDS DB by Nucleotide ID:ENST00000506516Re-query CCDS DB by Protein ID:ENSP00000424025
Original member Current member NCBI NM_001304382.1 NP_001291311.1 Accepted alive Link to Nucleotide Sequence:NM_001304382.1Link to Protein Sequence:NP_001291311.1Re-query CCDS DB by Nucleotide ID:NM_001304382Re-query CCDS DB by Protein ID:NP_001291311Link to BLAST:NP_001291311.1

Chromosomal Locations for CCDS 87264.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 143996299 143996304 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 143997540 143997634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 143999411 143999449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 144001185 144001242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (198 nt):
ATGCACACTTCAACCTCTTCTTCAGTCACAAAGAGTTACATCTCATCACAGACAAATGGAGAAACGGGAC
AACTTGTCCATCGTTTCACTGTACCAGCTCCTGTAGTGATAATACTCATTATTTTGTGTGTGATGGCTGG
TATTATTGGAACGATCCTCTTAATTTCTTACAGTATTCGCCGACTGATAAAGGCATGA

Translation (65 aa):
MHTSTSSSVTKSYISSQTNGETGQLVHRFTVPAPVVIILIILCVMAGIIGTILLISYSIRRLIKA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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