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Report for CCDS4021.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4021.1 Public Homo sapiens 5 ENC1 24 110 108 CCDS HistoryNCBI Gene:8507Re-query CCDS DB by CCDS ID:4021.1Re-query CCDS DB by GeneID:8507See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4021.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302351.9 ENSP00000306356.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302351.9Link to Ensembl Protein Viewer:ENSP00000306356.4Re-query CCDS DB by Nucleotide ID:ENST00000302351Re-query CCDS DB by Protein ID:ENSP00000306356
Original member Current member EBI ENST00000537006.1 ENSP00000446289.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000537006.1Link to Ensembl Protein Viewer:ENSP00000446289.1Re-query CCDS DB by Nucleotide ID:ENST00000537006Re-query CCDS DB by Protein ID:ENSP00000446289
Original member Current member EBI ENST00000618628.4 ENSP00000479101.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000618628.4Link to Ensembl Protein Viewer:ENSP00000479101.1Re-query CCDS DB by Nucleotide ID:ENST00000618628Re-query CCDS DB by Protein ID:ENSP00000479101
Original member Current member EBI ENST00000651128.1 ENSP00000499185.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000651128.1Link to Ensembl Protein Viewer:ENSP00000499185.1Re-query CCDS DB by Nucleotide ID:ENST00000651128Re-query CCDS DB by Protein ID:ENSP00000499185
Original member Current member NCBI NM_001256574.2 NP_001243503.1 Accepted alive Link to Nucleotide Sequence:NM_001256574.2Link to Protein Sequence:NP_001243503.1Re-query CCDS DB by Nucleotide ID:NM_001256574Re-query CCDS DB by Protein ID:NP_001243503Link to BLAST:NP_001243503.1
Original member Current member NCBI NM_001256575.2 NP_001243504.1 Accepted alive Link to Nucleotide Sequence:NM_001256575.2Link to Protein Sequence:NP_001243504.1Re-query CCDS DB by Nucleotide ID:NM_001256575Re-query CCDS DB by Protein ID:NP_001243504Link to BLAST:NP_001243504.1
Original member Current member NCBI NM_003633.4 NP_003624.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003633.4Link to Protein Sequence:NP_003624.1Re-query CCDS DB by Nucleotide ID:NM_003633Re-query CCDS DB by Protein ID:NP_003624Link to BLAST:NP_003624.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243503.1 589 O14682-1 589 100% 0 0
NP_001243504.1 589 O14682-1 589 100% 0 0
NP_003624.1 589 O14682-1 589 100% 0 0

Chromosomal Locations for CCDS 4021.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 74634716 74636485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1770 nt):
ATGTCAGTCAGTGTGCATGAGAACCGCAAGTCCAGGGCCAGCAGCGGCTCCATTAACATCTATCTGTTTC
ACAAGTCCTCCTACGCTGACAGCGTCCTCACTCACCTGAATCTTTTACGCCAGCAGCGTCTCTTCACTGA
CGTCCTTCTCCATGCCGGAAATAGGACCTTCCCTTGCCACCGGGCAGTGCTGGCTGCATGCAGTCGCTAC
TTTGAGGCCATGTTCAGTGGTGGCCTGAAAGAGAGCCAGGACAGTGAGGTCAACTTTGACAATTCCATCC
ACCCAGAAGTCTTGGAGCTGCTGCTTGACTATGCGTACTCCTCCCGGGTCATCATCAATGAAGAAAATGC
AGAATCGCTCCTGGAAGCTGGTGACATGCTGGAGTTTCAAGACATCCGGGATGCATGTGCAGAGTTCCTG
GAAAAGAACCTGCATCCCACCAACTGCCTGGGCATGCTGCTGCTGTCTGATGCACACCAGTGCACCAAGC
TGTACGAACTATCTTGGAGAATGTGTCTCAGCAACTTCCAAACCATCAGGAAGAATGAAGATTTCCTCCA
GCTGCCCCAGGACATGGTAGTGCAACTCTTGTCCAGTGAAGAGCTGGAGACAGAGGATGAAAGGCTTGTG
TACGAGTCTGCAATTAACTGGATCAGCTATGACCTGAAGAAGCGCTATTGCTACCTCCCAGAACTGTTGC
AGACAGTAAGGCTGGCACTTCTGCCAGCCATCTATCTCATGGAGAATGTGGCCATGGAGGAACTCATCAC
CAAGCAGAGAAAGAGTAAGGAAATTGTGGAAGAGGCCATCAGGTGCAAACTGAAAATCCTGCAGAATGAC
GGTGTGGTAACCAGCCTCTGTGCCCGACCTCGGAAAACTGGCCATGCCCTCTTCCTTCTGGGAGGACAGA
CTTTCATGTGTGACAAGTTGTATCTGGTAGACCAGAAGGCCAAAGAAATCATTCCCAAGGCTGACATTCC
CAGCCCAAGAAAAGAGTTTAGTGCATGTGCGATTGGCTGCAAAGTGTACATTACTGGGGGGCGGGGGTCT
GAAAATGGGGTCTCAAAAGATGTCTGGGTTTATGATACCCTGCACGAGGAGTGGTCCAAGGCTGCCCCCA
TGCTGGTGGCCAGGTTTGGCCATGGCTCTGCTGAACTGAAGCACTGCCTGTATGTGGTTGGGGGGCACAC
GGCCGCAACTGGCTGCCTCCCGGCCTCCCCCTCAGTCTCTCTAAAGCAGGTAGAACATTATGACCCCACA
ATCAACAAATGGACCATGGTGGCCCCACTCCGAGAAGGCGTTAGCAACGCCGCAGTAGTGAGTGCCAAAC
TTAAGTTATTTGCTTTCGGAGGTACCAGTGTCAGTCATGACAAGCTCCCCAAAGTTCAGTGTTACGATCA
GTGTGAAAACAGGTGGACTGTACCGGCCACCTGTCCCCAGCCCTGGCGTTACACAGCAGCAGCTGTGCTG
GGGAACCAGATTTTTATTATGGGGGGTGATACAGAATTCTCTGCCTGCTCTGCTTATAAATTCAACAGTG
AGACTTACCAGTGGACCAAGGTGGGAGATGTGACAGCAAAGCGCATGAGCTGCCATGCTGTGGCCTCTGG
AAACAAACTCTACGTGGTTGGAGGATACTTTGGCATTCAGCGATGCAAGACTTTGGACTGCTACGATCCA
ACATTAGACGTGTGGAACAGCATCACCACTGTCCCGTACTCGCTGATTCCTACTGCATTTGTCAGCACCT
GGAAACATCTGCCTTCTTAA

Translation (589 aa):
MSVSVHENRKSRASSGSINIYLFHKSSYADSVLTHLNLLRQQRLFTDVLLHAGNRTFPCHRAVLAACSRY
FEAMFSGGLKESQDSEVNFDNSIHPEVLELLLDYAYSSRVIINEENAESLLEAGDMLEFQDIRDACAEFL
EKNLHPTNCLGMLLLSDAHQCTKLYELSWRMCLSNFQTIRKNEDFLQLPQDMVVQLLSSEELETEDERLV
YESAINWISYDLKKRYCYLPELLQTVRLALLPAIYLMENVAMEELITKQRKSKEIVEEAIRCKLKILQND
GVVTSLCARPRKTGHALFLLGGQTFMCDKLYLVDQKAKEIIPKADIPSPRKEFSACAIGCKVYITGGRGS
ENGVSKDVWVYDTLHEEWSKAAPMLVARFGHGSAELKHCLYVVGGHTAATGCLPASPSVSLKQVEHYDPT
INKWTMVAPLREGVSNAAVVSAKLKLFAFGGTSVSHDKLPKVQCYDQCENRWTVPATCPQPWRYTAAAVL
GNQIFIMGGDTEFSACSAYKFNSETYQWTKVGDVTAKRMSCHAVASGNKLYVVGGYFGIQRCKTLDCYDP
TLDVWNSITTVPYSLIPTAFVSTWKHLPS


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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