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Report for CCDS92902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92902.1 Public Homo sapiens 2 HNRNPA3 24 110 108 CCDS HistoryNCBI Gene:220988Re-query CCDS DB by CCDS ID:92902.1Re-query CCDS DB by GeneID:220988See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92902.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000676488.1 ENSP00000503067.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676488.1Link to Ensembl Protein Viewer:ENSP00000503067.1Re-query CCDS DB by Nucleotide ID:ENST00000676488Re-query CCDS DB by Protein ID:ENSP00000503067
Original member Current member EBI ENST00000676681.1 ENSP00000503339.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676681.1Link to Ensembl Protein Viewer:ENSP00000503339.1Re-query CCDS DB by Nucleotide ID:ENST00000676681Re-query CCDS DB by Protein ID:ENSP00000503339
Original member Current member EBI ENST00000677043.1 ENSP00000504649.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000677043.1Link to Ensembl Protein Viewer:ENSP00000504649.1Re-query CCDS DB by Nucleotide ID:ENST00000677043Re-query CCDS DB by Protein ID:ENSP00000504649
Original member Current member NCBI NM_001330250.2 NP_001317179.1 Accepted alive Link to Nucleotide Sequence:NM_001330250.2Link to Protein Sequence:NP_001317179.1Re-query CCDS DB by Nucleotide ID:NM_001330250Re-query CCDS DB by Protein ID:NP_001317179Link to BLAST:NP_001317179.1
Original member Current member NCBI NM_001330251.2 NP_001317180.1 Accepted alive Link to Nucleotide Sequence:NM_001330251.2Link to Protein Sequence:NP_001317180.1Re-query CCDS DB by Nucleotide ID:NM_001330251Re-query CCDS DB by Protein ID:NP_001317180Link to BLAST:NP_001317180.1

Chromosomal Locations for CCDS 92902.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 177212800 177212871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177215539 177215661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177215750 177215896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177215978 177216188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177216503 177216592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177216676 177216771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177216860 177216940 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177219037 177219159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 177219247 177219299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGGAGGTAAAACCGCCGCCCGGTCGCCCCCAGCCCGACTCCGGCCGTCGCCGTCGCCGCCGGGGGGAGG
AGGGCCATGATCCAAAGGAACCAGAGCAGTTGAGAAAACTGTTTATTGGTGGTCTGAGCTTTGAAACTAC
AGATGATAGTTTACGAGAACATTTTGAGAAATGGGGCACACTCACAGATTGTGTGGTAATGAGAGACCCC
CAAACAAAACGTTCCAGGGGCTTTGGTTTTGTGACTTATTCTTGTGTTGAAGAGGTGGATGCAGCAATGT
GTGCTCGACCACACAAGGTTGATGGGCGTGTAGTGGAACCAAAGAGAGCTGTTTCTAGAGAGGATTCTGT
AAAGCCTGGTGCCCATCTAACAGTGAAGAAAATTTTTGTTGGTGGTATTAAAGAAGATACAGAAGAATAT
AATTTGAGAGACTACTTTGAAAAGTATGGCAAGATTGAAACCATAGAAGTTATGGAAGACAGGCAGAGTG
GAAAAAAGAGAGGATTTGCTTTTGTAACTTTTGATGATCATGATACAGTTGATAAAATTGTTGTTCAGAA
ATACCACACTATTAATGGGCATAATTGTGAAGTGAAAAAGGCCCTTTCTAAACAAGAGATGCAGTCTGCT
GGATCACAGAGAGGTCGTGGAGGTGGATCTGGCAATTTTATGGGTCGCGGAGGGAACTTTGGAGGTGGTG
GAGGTAATTTTGGCCGTGGTGGAAACTTTGGTGGAAGAGGAGGCTATGGTGGTGGAGGTGGTGGCAGCAG
AGGTAGTTATGGAGGAGGTGATGGTGGATATAATGGATTTGGAGGTGATGGTAACTATGGTGGTGGTGGG
AACTATAATGATTTTGGAAATTATAGTGGACAACAGCAATCAAATTATGGACCCATGAAAGGGGGCAGTT
TTGGTGGAAGAAGCTCGGGCAGTCCCTATGGTGGTGGTTATGGATCTGGTGGTGGAAGTGGTGGATATGG
TAGCAGAAGGTTCTAA

Translation (331 aa):
MEVKPPPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDP
QTKRSRGFGFVTYSCVEEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEY
NLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKALSKQEMQSA
GSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGGGDGGYNGFGGDGNYGGGG
NYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGGGYGSGGGSGGYGSRRF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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