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Report for CCDS34123.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34123.1 Public Homo sapiens 4 FRG2 24 110 108 CCDS HistoryNCBI Gene:448831Re-query CCDS DB by CCDS ID:34123.1Re-query CCDS DB by GeneID:448831See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34123.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000378763.1 ENSP00000368039.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000378763.1Link to Ensembl Protein Viewer:ENSP00000368039.1Re-query CCDS DB by Nucleotide ID:ENST00000378763Re-query CCDS DB by Protein ID:ENSP00000368039
Original member Current member NCBI NM_001005217.4 NP_001005217.1 Accepted alive Link to Nucleotide Sequence:NM_001005217.4Link to Protein Sequence:NP_001005217.1Re-query CCDS DB by Nucleotide ID:NM_001005217Re-query CCDS DB by Protein ID:NP_001005217Link to BLAST:NP_001005217.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005217.1 278 Q64ET8-1 278 100% 0 0

Chromosomal Locations for CCDS 34123.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 190025561 190026066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 190026384 190026461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 190026691 190026765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 190027027 190027204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGGGAAAGGGAAATGAAGACTCCGATCTCCACTGCTCCTCCATCCAGTGCTCCACTGACCAGCCCCCTT
TCCAACAGATCTCCTTTACAGAAAAGGGCTCAGATGAGAAGAAACCATTCAAAGAAAAAGGCAAGACCGC
CTTCTCCCATTCCAGTGAGAAGCACATACAAAGGCAAGGATCGGAGCCCAATCCAAACAAGGAGAATTCT
GAGGAAACCAAGCTCAAGGCCGGGAACAGCACTGCTGGATCAGAACCAGAGTCCAGCTCATATCGGGAAA
ACTGCAGGAAAAGAAAAATGAGTTCCAAGGACAGCTGCCAAGACACAGCAGGGAACTGTCCAGAAAAGGA
GTGCAGCTTGTCATTGAATAAAAAATCAAGATCCTCCACTGCTGTGCACAACAGTGAAATCCAGGAGACC
TGTGATGCCCACCATAGGGGACATTCCAGGGCTTGCACTGGGCACAGCAAGCGGCATAGGTCTCGGGCCC
TAGGAGTCCAAACACCGTCAATTCGAAAAAGCTTGGTGACTTCTGTGCGAGCTATGTCAGAGGCTGTTTA
TCAAGACCTAGCCCAGGTGTGGGCACAGCAGATCCATTCTCCACTTACCTGTGAGCAGCTGACACTGCTC
ACTCGGCTCCGGGGGCCTCTGTGTGCCCAGGTGCAGACCTTGTATTCCATGGCCACCCAGGCAGCTTATG
TCTTCCCTGCTGAGAGCTGGCTTGTCCCAGCCACACTGCCAGGTCCTGGGGAATCAGCCCTGGATAGAGA
AGCCCATCCCTTCCCTGGGCAGGAGATAACTGAGACTGTCAGTGGATCAGATGAGGCTAAGCTGTGA

Translation (278 aa):
MGKGNEDSDLHCSSIQCSTDQPPFQQISFTEKGSDEKKPFKEKGKTAFSHSSEKHIQRQGSEPNPNKENS
EETKLKAGNSTAGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECSLSLNKKSRSSTAVHNSEIQET
CDAHHRGHSRACTGHSKRHRSRALGVQTPSIRKSLVTSVRAMSEAVYQDLAQVWAQQIHSPLTCEQLTLL
TRLRGPLCAQVQTLYSMATQAAYVFPAESWLVPATLPGPGESALDREAHPFPGQEITETVSGSDEAKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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