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Report for CCDS48023.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48023.2 Under review, update Homo sapiens 9 ZBTB34 24 110 108 CCDS HistoryNCBI Gene:403341Re-query CCDS DB by CCDS ID:48023.2Re-query CCDS DB by GeneID:403341See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 48023.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319119.5 ENSP00000317534.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000319119.5Link to Ensembl Protein Viewer:ENSP00000317534.4Re-query CCDS DB by Nucleotide ID:ENST00000319119Re-query CCDS DB by Protein ID:ENSP00000317534
Original member Current member NCBI NM_001099270.4 NP_001092740.2 MANE Select Pending alive Link to Nucleotide Sequence:NM_001099270.4Link to Protein Sequence:NP_001092740.2Re-query CCDS DB by Nucleotide ID:NM_001099270Re-query CCDS DB by Protein ID:NP_001092740Link to BLAST:NP_001092740.2

Chromosomal Locations for CCDS 48023.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 126879400 126880914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGTCAGTAGAAATGGACAGCAGCAGTTTTATTCAGTTTGATGTGCCCGAGTACAGCAGCACCGTTCTGA
GCCAGCTAAACGAACTCCGCCTGCAGGGGAAACTATGTGACATCATTGTACACATTCAGGGTCAGCCATT
CCGAGCCCACAAAGCAGTCCTTGCTGCCAGCTCCCCATATTTCCGGGACCATTCAGCGTTAAGTACCATG
AGTGGCTTGTCAATATCAGTGATTAAAAATCCCAATGTGTTTGAGCAGTTGCTTTCTTTTTGTTACACTG
GAAGAATGTCCTTGCAGCTGAAGGATGTTGTCAGTTTTCTGACTGCAGCCAGCTTTCTTCAGATGCAGTG
TGTCATTGACAAGTGCACGCAGATCCTAGAGAGCATCCATTCCAAAATCAGCGTTGGAGATGTTGACTCT
GTTACCGTCGGTGCTGAAGAGAATCCCGAGAGTCGAAACGGAGTGAAAGACAGCAGCTTCTTTGCCAACC
CAGTGGAGATCTCTCCTCCATATTGCTCTCAGGGACGGCAGCCCACCGCAAGCAGTGACCTCCGGATGGA
GACGACCCCCAGCAAAGCTTTGCGCAGCCGCTTACAGGAGGAGGGGCACTCAGACCGCGGGAGCAGTGGG
AGCGTTTCTGAATATGAGATTCAGATAGAGGGAGACCATGAGCAAGGAGACCTATTGGTGAGGGAGAGCC
AGATCACCGAGGTGAAAGTGAAGATGGAGAAGTCCGACCGGCCCAGCTGTTCCGACAGCTCCTCCCTGGG
TGACGATGGGTACCACACCGAGATGGTTGATGGGGAACAAGTTGTGGCAGTGAATGTGGGCTCCTATGGT
TCTGTGCTCCAGCACGCATACTCCTATTCCCAAGCAGCCTCACAGCCAACCAATGTATCAGAAGCTTTTG
GAAGTTTGAGTAATTCCAGCCCATCCAGGTCCATGCTGAGCTGTTTCCGAGGAGGGCGTGCCCGCCAGAA
GCGGGCTTTGTCTGTCCACCTGCACAGTGACCTGCAGGGCCTGGTGCAGGGCTCTGACAGTGAAGCCATG
ATGAACAACCCCGGGTATGAGAGCAGTCCCCGGGAGAGGAGTGCGAGAGGGCATTGGTACCCGTACAATG
AGAGGTTGATCTGTATTTACTGTGGAAAGTCCTTCAACCAGAAAGGAAGCCTTGATAGGCACATGCGACT
CCATATGGGAATCACCCCCTTTGTGTGCAAGTTCTGTGGGAAGAAGTACACACGGAAGGACCAACTGGAG
TACCACATCCGGGGCCATACAGATGATAAACCATTCCGCTGTGAGATCTGCGGGAAGTGCTTTCCATTCC
AAGGTACCCTCAACCAGCACTTGCGGAAAAACCACCCAGGCGTTGCTGAAGTCAGGAGTCGCATTGAGTC
CCCCGAGAGAACAGATGTGTACGTGGAACAGAAACTAGAAAATGACGCATCGGCCTCAGAGATGGGCCTA
GATTCCCGGATGGAAATTCACACAGTGTCTGATGCTCCCGATTAA

Translation (504 aa):
MSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSPYFRDHSALSTM
SGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVIDKCTQILESIHSKISVGDVDS
VTVGAEENPESRNGVKDSSFFANPVEISPPYCSQGRQPTASSDLRMETTPSKALRSRLQEEGHSDRGSSG
SVSEYEIQIEGDHEQGDLLVRESQITEVKVKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYG
SVLQHAYSYSQAASQPTNVSEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSDLQGLVQGSDSEAM
MNNPGYESSPRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQLE
YHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVAEVRSRIESPERTDVYVEQKLENDASASEMGL
DSRMEIHTVSDAPD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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