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Report for CCDS7366.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7366.1 Public Homo sapiens 10 DYDC1 24 110 108 CCDS HistoryNCBI Gene:143241Re-query CCDS DB by CCDS ID:7366.1Re-query CCDS DB by GeneID:143241See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7366.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372202.6 ENSP00000361276.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372202.6Link to Ensembl Protein Viewer:ENSP00000361276.1Re-query CCDS DB by Nucleotide ID:ENST00000372202Re-query CCDS DB by Protein ID:ENSP00000361276
Original member Current member EBI ENST00000372204.7 ENSP00000361278.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372204.7Link to Ensembl Protein Viewer:ENSP00000361278.3Re-query CCDS DB by Nucleotide ID:ENST00000372204Re-query CCDS DB by Protein ID:ENSP00000361278
Original member Current member EBI ENST00000421924.6 ENSP00000402890.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000421924.6Link to Ensembl Protein Viewer:ENSP00000402890.3Re-query CCDS DB by Nucleotide ID:ENST00000421924Re-query CCDS DB by Protein ID:ENSP00000402890
Original member Current member NCBI NM_001269053.2 NP_001255982.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001269053.2Link to Protein Sequence:NP_001255982.1Re-query CCDS DB by Nucleotide ID:NM_001269053Re-query CCDS DB by Protein ID:NP_001255982Link to BLAST:NP_001255982.1
Original member Current member NCBI NM_001370155.1 NP_001357084.1 Accepted alive Link to Nucleotide Sequence:NM_001370155.1Link to Protein Sequence:NP_001357084.1Re-query CCDS DB by Nucleotide ID:NM_001370155Re-query CCDS DB by Protein ID:NP_001357084Link to BLAST:NP_001357084.1
Original member Current member NCBI NM_001370156.1 NP_001357085.1 Accepted alive Link to Nucleotide Sequence:NM_001370156.1Link to Protein Sequence:NP_001357085.1Re-query CCDS DB by Nucleotide ID:NM_001370156Re-query CCDS DB by Protein ID:NP_001357085Link to BLAST:NP_001357085.1
Original member Current member NCBI NM_138812.4 NP_620167.1 Accepted alive Link to Nucleotide Sequence:NM_138812.4Link to Protein Sequence:NP_620167.1Re-query CCDS DB by Nucleotide ID:NM_138812Re-query CCDS DB by Protein ID:NP_620167Link to BLAST:NP_620167.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001255982.1 177 Q8WWB3-1 177 100% 0 0
NP_001357084.1 177 Q8WWB3-1 177 100% 0 0
NP_001357085.1 177 Q8WWB3-1 177 100% 0 0
NP_620167.1 177 Q8WWB3-1 177 100% 0 0

Chromosomal Locations for CCDS 7366.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80336156 80336185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80338467 80338571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80339097 80339153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80342269 80342361 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80351901 80352002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80352455 80352601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (534 nt):
ATGGAGTCAATATATCTTCAAAAGCACCTTGGGGCCTGTTTAACTCAAGGTCTTGCAGAAGTGGCAAGAG
TTCGCCCAGTGGATCCGATAGAATATTTAGCATTGTGGATTTACAAGTATAAGGAAAATGTGACCATGGA
ACAACTGAGACAAAAGGAAATGGCCAAGCTGGAGCGTGAAAGAGAATTAGCTCTGATGGAGCAGGAAATG
ATGGAGAGGCTCAAAGCAGAGGAGCTCTTACTTCAGCAGCAACAGCTGGCATTGCAGCTAGAGTTGGAAA
TGCAAGAAAAGGAGAGGCAGAGAATACAAGAACTACAGAGAGCTCAAGAACAATTAGGCAAGGAGATGAG
AATGAATATGGAAAATCTAGTTAGGAATGAAGATATTCTACATTCAGAGGAAGCAACACTAGACTCAGGC
AAAACACTAGCTGAAATCAGCGATCGTTATGGAGCACCTAACTTGAGCAGAGTGGAAGAACTTGATGAAC
CAATGTTTTCTGATATTGCATTAAACATTGATCAAGATTTGTAG

Translation (177 aa):
MESIYLQKHLGACLTQGLAEVARVRPVDPIEYLALWIYKYKENVTMEQLRQKEMAKLERERELALMEQEM
MERLKAEELLLQQQQLALQLELEMQEKERQRIQELQRAQEQLGKEMRMNMENLVRNEDILHSEEATLDSG
KTLAEISDRYGAPNLSRVEELDEPMFSDIALNIDQDL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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