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Report for CCDS76223.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76223.1 Public Homo sapiens 1 TSACC 24 110 108 CCDS HistoryNCBI Gene:128229Re-query CCDS DB by CCDS ID:76223.1Re-query CCDS DB by GeneID:128229See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76223.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000481479.5 ENSP00000476780.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000481479.5Link to Ensembl Protein Viewer:ENSP00000476780.1Re-query CCDS DB by Nucleotide ID:ENST00000481479Re-query CCDS DB by Protein ID:ENSP00000476780
Original member Current member EBI ENST00000466306.5 ENSP00000477010.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000466306.5Link to Ensembl Protein Viewer:ENSP00000477010.1Re-query CCDS DB by Nucleotide ID:ENST00000466306Re-query CCDS DB by Protein ID:ENSP00000477010
Original member Current member EBI ENST00000470342.5 ENSP00000477074.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000470342.5Link to Ensembl Protein Viewer:ENSP00000477074.1Re-query CCDS DB by Nucleotide ID:ENST00000470342Re-query CCDS DB by Protein ID:ENSP00000477074
Original member Current member NCBI NM_001304822.2 NP_001291751.1 Accepted alive Link to Nucleotide Sequence:NM_001304822.2Link to Protein Sequence:NP_001291751.1Re-query CCDS DB by Nucleotide ID:NM_001304822Re-query CCDS DB by Protein ID:NP_001291751Link to BLAST:NP_001291751.1
Original member Current member NCBI NM_001304823.2 NP_001291752.1 Accepted alive Link to Nucleotide Sequence:NM_001304823.2Link to Protein Sequence:NP_001291752.1Re-query CCDS DB by Nucleotide ID:NM_001304823Re-query CCDS DB by Protein ID:NP_001291752Link to BLAST:NP_001291752.1
Original member Current member NCBI NM_001304824.2 NP_001291753.1 Accepted alive Link to Nucleotide Sequence:NM_001304824.2Link to Protein Sequence:NP_001291753.1Re-query CCDS DB by Nucleotide ID:NM_001304824Re-query CCDS DB by Protein ID:NP_001291753Link to BLAST:NP_001291753.1
Original member Current member NCBI NM_001304825.2 NP_001291754.1 Accepted alive Link to Nucleotide Sequence:NM_001304825.2Link to Protein Sequence:NP_001291754.1Re-query CCDS DB by Nucleotide ID:NM_001304825Re-query CCDS DB by Protein ID:NP_001291754Link to BLAST:NP_001291754.1

Chromosomal Locations for CCDS 76223.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 156339758 156339791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156344580 156344708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 156346779 156346918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (303 nt):
ATGGAGCGGCACACTAGTCATCCTAACAGAAAAGTTCCAGCCAAAGAGGAAGCTAATGCTGTGCCTCTCT
GTAGAGCAAAACCCTCCCCCAGCTATATTAATCTTCAAGCAAGTTCCCCACCAGCCACTTTTCTGAACAT
CCAGACAACAAAGCTGCCCTCGGCCCAAGGAATGCCTAGGACTCCTGGAATGTATGTATGCAAACCTCCA
GCTTCAGACCCAGCTCGCCCAACAACAGATGGCTGTTTTGGAACATTTACAGGCATCTGTGACACAACTG
GCTCCTGGGAGGGGAAGCAATAA

Translation (100 aa):
MERHTSHPNRKVPAKEEANAVPLCRAKPSPSYINLQASSPPATFLNIQTTKLPSAQGMPRTPGMYVCKPP
ASDPARPTTDGCFGTFTGICDTTGSWEGKQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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