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Report for CCDS17322.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17322.1 Public Mus musculus 3 Spry1 23 108 98 CCDS HistoryNCBI Gene:24063Re-query CCDS DB by CCDS ID:17322.1Re-query CCDS DB by GeneID:24063See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17322.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000038569.7 ENSMUSP00000049292.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000038569.7Link to Ensembl Protein Viewer:ENSMUSP00000049292.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000038569Re-query CCDS DB by Protein ID:ENSMUSP00000049292
Original member Current member EBI ENSMUST00000108107.1 ENSMUSP00000103742.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108107.1Link to Ensembl Protein Viewer:ENSMUSP00000103742.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108107Re-query CCDS DB by Protein ID:ENSMUSP00000103742
Original member Current member EBI ENSMUST00000108109.7 ENSMUSP00000103744.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000108109.7Link to Ensembl Protein Viewer:ENSMUSP00000103744.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000108109Re-query CCDS DB by Protein ID:ENSMUSP00000103744
Original member Current member NCBI NM_001305440.1 NP_001292369.1 Accepted alive Link to Nucleotide Sequence:NM_001305440.1Link to Protein Sequence:NP_001292369.1Re-query CCDS DB by Nucleotide ID:NM_001305440Re-query CCDS DB by Protein ID:NP_001292369Link to BLAST:NP_001292369.1
Original member Current member NCBI NM_001305441.1 NP_001292370.1 Accepted alive Link to Nucleotide Sequence:NM_001305441.1Link to Protein Sequence:NP_001292370.1Re-query CCDS DB by Nucleotide ID:NM_001305441Re-query CCDS DB by Protein ID:NP_001292370Link to BLAST:NP_001292370.1
Original member Current member NCBI NM_001305442.1 NP_001292371.1 Accepted alive Link to Nucleotide Sequence:NM_001305442.1Link to Protein Sequence:NP_001292371.1Re-query CCDS DB by Nucleotide ID:NM_001305442Re-query CCDS DB by Protein ID:NP_001292371Link to BLAST:NP_001292371.1
Original member Current member NCBI NM_011896.3 NP_036026.1 Accepted alive Link to Nucleotide Sequence:NM_011896.3Link to Protein Sequence:NP_036026.1Re-query CCDS DB by Nucleotide ID:NM_011896Re-query CCDS DB by Protein ID:NP_036026Link to BLAST:NP_036026.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001292369.1 313 Q9QXV9 313 100% 0 0
NP_001292370.1 313 Q9QXV9 313 100% 0 0
NP_001292371.1 313 Q9QXV9 313 100% 0 0
NP_036026.1 313 Q9QXV9 313 100% 0 0

Chromosomal Locations for CCDS 17322.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 37642610 37643551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (942 nt):
ATGGATTCCCCAAGTCAGCATGGCAGCCACACTTCGCTAGTGGTGATTCAGCCACCGGCTGTGGAAGGCC
GGCAGAGGTTAGACTATGACAGGGACACTCAGCCTGCTACGATTCTGTCCCTAGACCAGATCAAAGCCAT
CAGAGGCAGCAATGAATACACAGAGGGACCTTCGGTAGCGAGAAGACCTGCTCCTCGCACTGCACCAAGA
CCCGAAAAGCAGGAAAGGACTCATGAAATCATACCAGCCAATGTGAATAGCAGCTACGAGCACCGACCTG
CCAGCCACCCGGGCAACGCCAGGGGCTCGGTGCTGAGCAGGTCCACCAGCACCGGAAGCGCGGCCAGCTC
AGGGAGCAGCAGCAGTGTGTCTTCTGAGCAGGGCCTATTAGGACGGTCTCCGCCCACCAGGCCCATCCCA
GGTCATAGGTCAGATCGGGTCATCCGGACCCAGCCCAAGCAGCTGCTGGTGGAAGACTTGAAGGCCTCCT
TGAAAGAGGACCCCACCCAGCACAAGTTCATCTGCGAACAGTGTGGCAAGTGCAAATGTGGAGAGTGTAC
GGCCCCCCGGGCCCTGCCCTCCTGTCTGGCCTGTGATCGGCAGTGCCTCTGCTCCGCGGAGAGCATGGTG
GAATACGGGACCTGCATGTGCCTGGTCAAGGGCATTTTCTACCACTGCTCCAATGATGATGATGGAGGTT
CTTACTCGGATAACCCATGCTCCTGTTCACAGTCCCACTGCTGCTCCAGATACCTGTGCATGGGAGCCCT
GTCTTTGTGCCTACCCTGCTTGCTCTGCTACCCTCCCGCCAAGGGCTGCCTGAAGCTGTGCAGGGGCTGT
TACGACTGGACCCACCGCCCTGGCTGCAGGTGTAGAAACTCCAACACTGTCTATTGTAAGCTGGAGAGCT
GCCCCTCAAGGGCTCAGGGCAAACTGTCATGA

Translation (313 aa):
MDSPSQHGSHTSLVVIQPPAVEGRQRLDYDRDTQPATILSLDQIKAIRGSNEYTEGPSVARRPAPRTAPR
PEKQERTHEIIPANVNSSYEHRPASHPGNARGSVLSRSTSTGSAASSGSSSSVSSEQGLLGRSPPTRPIP
GHRSDRVIRTQPKQLLVEDLKASLKEDPTQHKFICEQCGKCKCGECTAPRALPSCLACDRQCLCSAESMV
EYGTCMCLVKGIFYHCSNDDDGGSYSDNPCSCSQSHCCSRYLCMGALSLCLPCLLCYPPAKGCLKLCRGC
YDWTHRPGCRCRNSNTVYCKLESCPSRAQGKLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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