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Report for CCDS12884.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12884.1 Public Homo sapiens 19 RPS9 24 110 108 CCDS HistoryNCBI Gene:6203Re-query CCDS DB by CCDS ID:12884.1Re-query CCDS DB by GeneID:6203See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12884.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302907.9 ENSP00000302896.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302907.9Link to Ensembl Protein Viewer:ENSP00000302896.4Re-query CCDS DB by Nucleotide ID:ENST00000302907Re-query CCDS DB by Protein ID:ENSP00000302896
Original member Current member EBI ENST00000391752.5 ENSP00000375632.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391752.5Link to Ensembl Protein Viewer:ENSP00000375632.1Re-query CCDS DB by Nucleotide ID:ENST00000391752Re-query CCDS DB by Protein ID:ENSP00000375632
Original member Current member EBI ENST00000391753.6 ENSP00000375633.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391753.6Link to Ensembl Protein Viewer:ENSP00000375633.2Re-query CCDS DB by Nucleotide ID:ENST00000391753Re-query CCDS DB by Protein ID:ENSP00000375633
Original member Current member NCBI NM_001013.4 NP_001004.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013.4Link to Protein Sequence:NP_001004.2Re-query CCDS DB by Nucleotide ID:NM_001013Re-query CCDS DB by Protein ID:NP_001004Link to BLAST:NP_001004.2
Original member Current member NCBI NM_001321701.2 NP_001308630.1 Accepted alive Link to Nucleotide Sequence:NM_001321701.2Link to Protein Sequence:NP_001308630.1Re-query CCDS DB by Nucleotide ID:NM_001321701Re-query CCDS DB by Protein ID:NP_001308630Link to BLAST:NP_001308630.1
Original member Current member NCBI NM_001321702.2 NP_001308631.1 Accepted alive Link to Nucleotide Sequence:NM_001321702.2Link to Protein Sequence:NP_001308631.1Re-query CCDS DB by Nucleotide ID:NM_001321702Re-query CCDS DB by Protein ID:NP_001308631Link to BLAST:NP_001308631.1
Original member Current member NCBI NM_001321704.2 NP_001308633.1 Accepted alive Link to Nucleotide Sequence:NM_001321704.2Link to Protein Sequence:NP_001308633.1Re-query CCDS DB by Nucleotide ID:NM_001321704Re-query CCDS DB by Protein ID:NP_001308633Link to BLAST:NP_001308633.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001004.2 194 P46781 194 100% 0 0
NP_001308630.1 194 P46781 194 100% 0 0
NP_001308631.1 194 P46781 194 100% 0 0
NP_001308633.1 194 P46781 194 100% 0 0

Chromosomal Locations for CCDS 12884.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 54201185 54201281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54201487 54201609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54206276 54206462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 54207398 54207575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (585 nt):
ATGCCAGTGGCCCGGAGCTGGGTTTGTCGCAAAACTTATGTGACCCCGCGGAGACCCTTCGAGAAATCTC
GTCTCGACCAAGAGCTGAAGCTGATCGGCGAGTATGGGCTCCGGAACAAACGTGAGGTCTGGAGGGTCAA
ATTTACCCTGGCCAAGATCCGCAAGGCCGCCCGGGAACTGCTGACGCTTGATGAGAAGGACCCACGGCGT
CTGTTCGAAGGCAACGCCCTGCTGCGGCGGCTGGTCCGCATTGGGGTGCTGGATGAGGGCAAGATGAAGC
TGGATTACATCCTGGGCCTGAAGATAGAGGATTTCTTAGAGAGACGCCTGCAGACCCAGGTCTTCAAGCT
GGGCTTGGCCAAGTCCATCCACCACGCTCGCGTGCTGATCCGCCAGCGCCATATCAGGGTCCGCAAGCAG
GTGGTGAACATCCCGTCCTTCATTGTCCGCCTGGATTCCCAGAAGCACATCGACTTCTCTCTGCGCTCTC
CCTACGGGGGTGGCCGCCCGGGCCGCGTGAAGAGGAAGAATGCCAAGAAGGGCCAGGGTGGGGCTGGGGC
TGGAGACGACGAGGAGGAGGATTAA

Translation (194 aa):
MPVARSWVCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR
LFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQ
VVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGGAGAGDDEEED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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