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Report for CCDS10503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10503.1 Public Homo sapiens 16 ZSCAN32 24 110 108 CCDS HistoryNCBI Gene:54925Re-query CCDS DB by CCDS ID:10503.1Re-query CCDS DB by GeneID:54925See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10503.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000304926.7 ENSP00000302502.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000304926.7Link to Ensembl Protein Viewer:ENSP00000302502.3Re-query CCDS DB by Nucleotide ID:ENST00000304926Re-query CCDS DB by Protein ID:ENSP00000302502
Original member Current member NCBI NM_001324340.2 NP_001311269.1 Accepted alive Link to Nucleotide Sequence:NM_001324340.2Link to Protein Sequence:NP_001311269.1Re-query CCDS DB by Nucleotide ID:NM_001324340Re-query CCDS DB by Protein ID:NP_001311269Link to BLAST:NP_001311269.1
Original member Current member NCBI NM_001324341.2 NP_001311270.1 Accepted alive Link to Nucleotide Sequence:NM_001324341.2Link to Protein Sequence:NP_001311270.1Re-query CCDS DB by Nucleotide ID:NM_001324341Re-query CCDS DB by Protein ID:NP_001311270Link to BLAST:NP_001311270.1
Original member Current member NCBI NM_001324342.2 NP_001311271.1 Accepted alive Link to Nucleotide Sequence:NM_001324342.2Link to Protein Sequence:NP_001311271.1Re-query CCDS DB by Nucleotide ID:NM_001324342Re-query CCDS DB by Protein ID:NP_001311271Link to BLAST:NP_001311271.1
Original member Current member NCBI NM_001324344.2 NP_001311273.1 Accepted alive Link to Nucleotide Sequence:NM_001324344.2Link to Protein Sequence:NP_001311273.1Re-query CCDS DB by Nucleotide ID:NM_001324344Re-query CCDS DB by Protein ID:NP_001311273Link to BLAST:NP_001311273.1
Original member Current member NCBI NM_001324345.2 NP_001311274.1 Accepted alive Link to Nucleotide Sequence:NM_001324345.2Link to Protein Sequence:NP_001311274.1Re-query CCDS DB by Nucleotide ID:NM_001324345Re-query CCDS DB by Protein ID:NP_001311274Link to BLAST:NP_001311274.1
Original member Current member NCBI NM_017810.4 NP_060280.2 Accepted alive Link to Nucleotide Sequence:NM_017810.4Link to Protein Sequence:NP_060280.2Re-query CCDS DB by Nucleotide ID:NM_017810Re-query CCDS DB by Protein ID:NP_060280Link to BLAST:NP_060280.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001311269.1 485 Q9NX65-2 485 100% 0 0
NP_001311270.1 485 Q9NX65-2 485 100% 0 0
NP_001311271.1 485 Q9NX65-2 485 100% 0 0
NP_001311273.1 485 Q9NX65-2 485 100% 0 0
NP_001311274.1 485 Q9NX65-2 485 100% 0 0
NP_060280.2 485 Q9NX65-2 485 100% 0 0

Chromosomal Locations for CCDS 10503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 3382852 3383711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3384459 3384941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 3390010 3390124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1458 nt):
ATGCGTGACAACAGAGCTGTATCCCTCTGTCAGCAAGAATGGATGTGCCCAGGCCCTGCACAAAGGGCCC
TCTACAGGGGTGCCACCCAGAGGAAGGACAGTCACGTCTCGCTGGCAACAGGTGTGCCCTGGGGCTATGA
AGAGACCAAGACGCTCCTGGCTATTCTTAGTAGTTCTCAATTTTATGGAAAACTCCAGACCTGTCAGCAG
AACAGCCAGATCTACAGGGCCATGGCGGAAGGACTCTGGGAGCAGGGTTTTCTGCGGACCCCAGAACAGT
GTCGCACCAAGTTCAAAAGCCTACAGTTGAGTTACCGCAAAGTGAGGAGAGGCCGTGTGCCTGAGCCTTG
TATCTTTTATGAGGAAATGAATGCTCTTTCAGGCTCCTGGGCCTCTGCACCTCCTATGGCAAGCGATGCT
GTTCCTGGCCAAGAAGGAAGTGATATTGAGGCTGGAGAGCTGAATCACCAGAATGGGGAACCCACGGAGG
TAGAAGATGGCACTGTGGATGGTGCAGACAGGGATGAAAAGGACTTCAGGAATCCTGGCCAGGAAGTCAG
GAAACTAGACCTGCCAGTGCTGTTCCCAAACAGACTTGGTTTTGAGTTCAAGAACGAGATTAAAAAAGAA
AATCTAAAATGGGATGATTCAGAGGAAGTAGAAATAAACAAGGCTTTACAGAGAAAGTCCAGAGGAGTTT
ATTGGCACTCTGAGCTACAAAAAGGCTTGGAGAGTGAGCCAACATCAAGAAGGCAATGTAGAAATTCTCC
AGGGGAGAGTGAGGAGAAAACCCCATCCCAGGAGAAGATGAGTCACCAGAGTTTTTGTGCCAGGGACAAA
GCCTGTACACATATCCTCTGTGGGAAAAACTGCTCTCAGAGTGTGCACTCTCCCCACAAGCCAGCGCTCA
AACTGGAAAAAGTATCTCAATGTCCTGAATGTGGGAAAACCTTTAGCCGAAGTTCTTATCTTGTTCGGCA
TCAAAGAATCCACACAGGCGAGAAGCCTCACAAGTGCAGTGAGTGCGGGAAGGGCTTTAGTGAGCGCTCC
AACCTCACTGCCCACCTACGAACTCACACAGGGGAGAGGCCCTATCAGTGTGGGCAATGTGGGAAAAGCT
TCAACCAGAGTTCCAGCCTCATTGTCCACCAGAGGACCCATACCGGGGAAAAGCCTTACCAGTGCATTGT
CTGTGGAAAGAGATTCAACAACAGTTCCCAGTTCAGTGCTCACCGGCGCATCCACACTGGGGAGAGCCCA
TACAAGTGTGCAGTGTGTGGGAAAATCTTCAACAATAGCTCCCACTTCAGTGCCCACCGAAAAACCCACA
CTGGTGAAAAGCCTTACAGGTGTTCTCACTGTGAGAGAGGCTTCACTAAGAACTCTGCCCTCACCCGTCA
TCAGACAGTACACATGAAAGCAGTACTCTCATCACAGGAAGGAAGAGATGCGTTATGA

Translation (485 aa):
MRDNRAVSLCQQEWMCPGPAQRALYRGATQRKDSHVSLATGVPWGYEETKTLLAILSSSQFYGKLQTCQQ
NSQIYRAMAEGLWEQGFLRTPEQCRTKFKSLQLSYRKVRRGRVPEPCIFYEEMNALSGSWASAPPMASDA
VPGQEGSDIEAGELNHQNGEPTEVEDGTVDGADRDEKDFRNPGQEVRKLDLPVLFPNRLGFEFKNEIKKE
NLKWDDSEEVEINKALQRKSRGVYWHSELQKGLESEPTSRRQCRNSPGESEEKTPSQEKMSHQSFCARDK
ACTHILCGKNCSQSVHSPHKPALKLEKVSQCPECGKTFSRSSYLVRHQRIHTGEKPHKCSECGKGFSERS
NLTAHLRTHTGERPYQCGQCGKSFNQSSSLIVHQRTHTGEKPYQCIVCGKRFNNSSQFSAHRRIHTGESP
YKCAVCGKIFNNSSHFSAHRKTHTGEKPYRCSHCERGFTKNSALTRHQTVHMKAVLSSQEGRDAL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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