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Report for CCDS86783.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
86783.1 |
Public |
Homo sapiens |
19 |
CALM3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:808](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:86783.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:808](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 86783.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000391918.6 |
ENSP00000375785.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000391918.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000375785.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000391918](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000375785](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000594523.5 |
ENSP00000468877.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000594523.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000468877.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000594523](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000468877](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000598871.5 |
ENSP00000470502.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000598871.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000470502.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000598871](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000470502](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000599839.5 |
ENSP00000471225.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000599839.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000471225.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000599839](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000471225](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001329921.1 |
NP_001316850.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001329921.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001316850.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001329921](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001316850](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001316850.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001329923.1 |
NP_001316852.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001329923.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001316852.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001329923](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001316852](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001316852.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001329924.2 |
NP_001316853.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001329924.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001316853.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001329924](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001316853](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001316853.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001329925.2 |
NP_001316854.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001329925.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001316854.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001329925](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001316854](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001316854.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001329926.2 |
NP_001316855.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001329926.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001316855.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001329926](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001316855](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001316855.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 86783.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (342 nt): ATGAGATCCCTGGGACAGAACCCCACTGAAGCAGAGCTGCAGGATATGATCAATGAGGTGGATGCAGATG GGAACGGGACCATTGACTTCCCGGAGTTCCTGACCATGATGGCCAGAAAGATGAAGGACACAGACAGTGA GGAGGAGATCCGAGAGGCGTTCCGTGTCTTTGACAAGGATGGGAATGGCTACATCAGCGCCGCAGAGCTG CGTCACGTAATGACGAACCTGGGGGAGAAGCTGACCGATGAGGAGGTGGATGAGATGATCAGGGAGGCTG ACATCGATGGAGATGGCCAGGTCAATTATGAAGAGTTTGTACAGATGATGACTGCAAAGTGA
Translation (113 aa): MRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK
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