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Report for CCDS10211.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10211.1 Public Homo sapiens 15 INTS14 24 110 108 CCDS HistoryNCBI Gene:81556Re-query CCDS DB by CCDS ID:10211.1Re-query CCDS DB by GeneID:81556See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10211.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000313182.7 ENSP00000326379.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000313182.7Link to Ensembl Protein Viewer:ENSP00000326379.2Re-query CCDS DB by Nucleotide ID:ENST00000313182Re-query CCDS DB by Protein ID:ENSP00000326379
Original member NCBI NM_001366360.2 NP_001353289.1 Updated not alive Link to Nucleotide Sequence:NM_001366360.2Link to Protein Sequence:NP_001353289.1Re-query CCDS DB by Nucleotide ID:NM_001366360Re-query CCDS DB by Protein ID:NP_001353289
Current member NCBI NM_001366360.3 NP_001353289.1 Accepted alive Link to Nucleotide Sequence:NM_001366360.3Link to Protein Sequence:NP_001353289.1Re-query CCDS DB by Nucleotide ID:NM_001366360Re-query CCDS DB by Protein ID:NP_001353289Link to BLAST:NP_001353289.1
Original member Current member NCBI NM_001394794.1 NP_001381723.1 Accepted alive Link to Nucleotide Sequence:NM_001394794.1Link to Protein Sequence:NP_001381723.1Re-query CCDS DB by Nucleotide ID:NM_001394794Re-query CCDS DB by Protein ID:NP_001381723Link to BLAST:NP_001381723.1
Original member Current member NCBI NM_001394796.1 NP_001381725.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001394796.1Link to Protein Sequence:NP_001381725.1Re-query CCDS DB by Nucleotide ID:NM_001394796Re-query CCDS DB by Protein ID:NP_001381725Link to BLAST:NP_001381725.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001353289.1 518 Q96SY0-1 518 100% 0 0
NP_001381723.1 518 Q96SY0-1 518 100% 0 0
NP_001381725.1 518 Q96SY0-1 518 100% 0 0

Chromosomal Locations for CCDS 10211.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 65579408 65579659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65581954 65582019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65584770 65584888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65591598 65591731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65593428 65593572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65595733 65595825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65598321 65598463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65598872 65598990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65599774 65599929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65605129 65605236 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 65607159 65607380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1557 nt):
ATGCCGACAGTGGTGGTAATGGATGTATCCCTTTCCATGACCCGACCTGTGTCTATTGAGGGGTCCGAGG
AATACCAGCGTAAGCACCTAGCAGCCCATGGTTTAACGATGCTGTTTGAGCACATGGCCACAAATTACAA
GCTTGAATTTACAGCACTTGTGGTTTTTTCATCACTTTGGGAGTTGATGGTCCCCTTCACGAGAGATTAT
AATACCCTACAGGAAGCACTAAGTAATATGGATGATTATGACAAAACCTGCTTGGAGTCTGCATTAGTTG
GTGTTTGCAATATCGTTCAGCAAGAATGGGGTGGTGCAATTCCTTGCCAGGTTGTCCTGGTGACAGACGG
CTGTCTTGGCATTGGTAGAGGGTCACTGCGACATTCCCTAGCCACTCAAAATCAACGAAGTGAGAGCAAC
AGGTTTCCACTACCTTTTCCTTTCCCATCTAAGTTATATATCATGTGCATGGCGAATTTGGAGGAGCTCC
AGAGCACCGATTCCTTGGAATGCCTTGAACGTCTCATAGATTTAAACAATGGTGAAGGGCAGATTTTTAC
TATTGATGGCCCCCTGTGCTTGAAGAATGTACAGTCTATGTTTGGAAAACTGATAGATTTGGCATATACG
CCTTTCCATGCTGTTCTCAAGTGTGGCCACCTAACTGCTGATGTACAAGTCTTCCCCAGGCCAGAACCTT
TTGTTGTAGATGAAGAAATTGATCCTATCCCTAAAGTCATTAACACAGATTTGGAAATAGTGGGATTTAT
TGATATAGCTGATATTTCAAGTCCCCCAGTTCTGTCCAGACATCTGGTCTTACCTATAGCACTTAACAAA
GAAGGTGATGAGGTGGGTACTGGCATCACTGATGACAATGAAGATGAAAATTCAGCCAATCAGATTGCAG
GCAAAATACCCAACTTTTGTGTCCTGCTCCATGGTAGCCTAAAAGTGGAAGGAATGGTAGCGATTGTTCA
ATTAGGTCCTGAATGGCATGGAATGCTCTACTCCCAAGCTGACAGCAAGAAGAAATCAAACCTCATGATG
TCTCTCTTTGAGCCTGGCCCAGAACCTCTCCCATGGCTAGGGAAAATGGCACAGTTGGGTCCTATTTCAG
ATGCTAAAGAAAACCCTTATGGCGAGGATGACAATAAGAGTCCATTCCCCCTGCAGCCCAAAAACAAACG
CAGTTATGCCCAGAATGTGACTGTCTGGATCAAACCCAGCGGCCTGCAGACAGATGTACAGAAGATTTTA
AGAAATGCAAGGAAACTACCTGAAAAAACACAGACATTCTATAAGGAGCTGAACCGTTTGCGAAAGGCCG
CTCTAGCCTTTGGTTTCCTGGACCTGCTGAAAGGGGTGGCTGACATGCTGGAAAGGGAATGCACACTGCT
GCCTGAGACAGCCCACCCTGATGCTGCATTCCAGCTGACCCATGCTGCCCAGCAGCTCAAGCTGGCCAGT
ACCGGCACCTCTGAGTATGCCGCTTATGACCAGAACATCACACCTTTGCACACGGACTTCTCTGGGAGCA
GCACTGAAAGAATTTGA

Translation (518 aa):
MPTVVVMDVSLSMTRPVSIEGSEEYQRKHLAAHGLTMLFEHMATNYKLEFTALVVFSSLWELMVPFTRDY
NTLQEALSNMDDYDKTCLESALVGVCNIVQQEWGGAIPCQVVLVTDGCLGIGRGSLRHSLATQNQRSESN
RFPLPFPFPSKLYIMCMANLEELQSTDSLECLERLIDLNNGEGQIFTIDGPLCLKNVQSMFGKLIDLAYT
PFHAVLKCGHLTADVQVFPRPEPFVVDEEIDPIPKVINTDLEIVGFIDIADISSPPVLSRHLVLPIALNK
EGDEVGTGITDDNEDENSANQIAGKIPNFCVLLHGSLKVEGMVAIVQLGPEWHGMLYSQADSKKKSNLMM
SLFEPGPEPLPWLGKMAQLGPISDAKENPYGEDDNKSPFPLQPKNKRSYAQNVTVWIKPSGLQTDVQKIL
RNARKLPEKTQTFYKELNRLRKAALAFGFLDLLKGVADMLERECTLLPETAHPDAAFQLTHAAQQLKLAS
TGTSEYAAYDQNITPLHTDFSGSSTERI


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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