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Report for CCDS14083.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14083.1 Public Homo sapiens 22 MLC1 24 110 108 CCDS HistoryNCBI Gene:23209Re-query CCDS DB by CCDS ID:14083.1Re-query CCDS DB by GeneID:23209See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14083.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311597.10 ENSP00000310375.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311597.10Link to Ensembl Protein Viewer:ENSP00000310375.6Re-query CCDS DB by Nucleotide ID:ENST00000311597Re-query CCDS DB by Protein ID:ENSP00000310375
Original member Current member EBI ENST00000395876.6 ENSP00000379216.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395876.6Link to Ensembl Protein Viewer:ENSP00000379216.2Re-query CCDS DB by Nucleotide ID:ENST00000395876Re-query CCDS DB by Protein ID:ENSP00000379216
Original member Current member NCBI NM_001376472.1 NP_001363401.1 Accepted alive Link to Nucleotide Sequence:NM_001376472.1Link to Protein Sequence:NP_001363401.1Re-query CCDS DB by Nucleotide ID:NM_001376472Re-query CCDS DB by Protein ID:NP_001363401Link to BLAST:NP_001363401.1
Original member Current member NCBI NM_001376473.1 NP_001363402.1 Accepted alive Link to Nucleotide Sequence:NM_001376473.1Link to Protein Sequence:NP_001363402.1Re-query CCDS DB by Nucleotide ID:NM_001376473Re-query CCDS DB by Protein ID:NP_001363402Link to BLAST:NP_001363402.1
Original member Current member NCBI NM_001376474.1 NP_001363403.1 Accepted alive Link to Nucleotide Sequence:NM_001376474.1Link to Protein Sequence:NP_001363403.1Re-query CCDS DB by Nucleotide ID:NM_001376474Re-query CCDS DB by Protein ID:NP_001363403Link to BLAST:NP_001363403.1
Original member Current member NCBI NM_001376475.1 NP_001363404.1 Accepted alive Link to Nucleotide Sequence:NM_001376475.1Link to Protein Sequence:NP_001363404.1Re-query CCDS DB by Nucleotide ID:NM_001376475Re-query CCDS DB by Protein ID:NP_001363404Link to BLAST:NP_001363404.1
Original member Current member NCBI NM_001376476.1 NP_001363405.1 Accepted alive Link to Nucleotide Sequence:NM_001376476.1Link to Protein Sequence:NP_001363405.1Re-query CCDS DB by Nucleotide ID:NM_001376476Re-query CCDS DB by Protein ID:NP_001363405Link to BLAST:NP_001363405.1
Original member Current member NCBI NM_001376477.1 NP_001363406.1 Accepted alive Link to Nucleotide Sequence:NM_001376477.1Link to Protein Sequence:NP_001363406.1Re-query CCDS DB by Nucleotide ID:NM_001376477Re-query CCDS DB by Protein ID:NP_001363406Link to BLAST:NP_001363406.1
Original member Current member NCBI NM_001376478.1 NP_001363407.1 Accepted alive Link to Nucleotide Sequence:NM_001376478.1Link to Protein Sequence:NP_001363407.1Re-query CCDS DB by Nucleotide ID:NM_001376478Re-query CCDS DB by Protein ID:NP_001363407Link to BLAST:NP_001363407.1
Original member Current member NCBI NM_015166.4 NP_055981.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015166.4Link to Protein Sequence:NP_055981.1Re-query CCDS DB by Nucleotide ID:NM_015166Re-query CCDS DB by Protein ID:NP_055981Link to BLAST:NP_055981.1
Original member Current member NCBI NM_139202.3 NP_631941.1 Accepted alive Link to Nucleotide Sequence:NM_139202.3Link to Protein Sequence:NP_631941.1Re-query CCDS DB by Nucleotide ID:NM_139202Re-query CCDS DB by Protein ID:NP_631941Link to BLAST:NP_631941.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001363401.1 377 Q15049-1 377 100% 0 0
NP_001363402.1 377 Q15049-1 377 100% 0 0
NP_001363403.1 377 Q15049-1 377 100% 0 0
NP_001363404.1 377 Q15049-1 377 100% 0 0
NP_001363405.1 377 Q15049-1 377 100% 0 0
NP_001363406.1 377 Q15049-1 377 100% 0 0
NP_001363407.1 377 Q15049-1 377 100% 0 0
NP_055981.1 377 Q15049-1 377 100% 0 0
NP_631941.1 377 Q15049-1 377 100% 0 0

Chromosomal Locations for CCDS 14083.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50061583 50061657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50064034 50064198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50068433 50068555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50070527 50070583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50074216 50074332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50076841 50076912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50077401 50077502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50079918 50080019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50080344 50080397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50083084 50083173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50084726 50084902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGACCCAGGAGCCATTCAGAGAGGAGCTGGCCTATGACCGGATGCCCACGCTGGAGCGGGGCCGGCAAG
ACCCCGCCAGCTATGCCCCAGACGCGAAGCCGAGCGACCTGCAGCTGTCGAAGAGACTGCCCCCCTGCTT
CAGCCACAAGACGTGGGTCTTCTCTGTGCTGATGGGGAGCTGCCTCCTGGTGACCTCGGGGTTTTCGCTG
TACCTGGGGAACGTGTTCCCGGCTGAGATGGATTACTTGCGCTGTGCTGCAGGCTCTTGCATCCCCTCGG
CAATTGTGAGCTTCACCGTCTCCAGGAGGAACGCCAATGTGATTCCCAACTTTCAGATATTGTTTGTTTC
CACGTTTGCTGTGACCACTACGTGTTTAATTTGGTTTGGATGCAAACTAGTCCTGAACCCATCAGCAATA
AACATCAACTTCAACCTCATCCTGCTGCTCCTGCTGGAGCTGCTCATGGCGGCCACGGTGATCATCGCTG
CACGGTCCAGCGAGGAGGACTGCAAGAAAAAGAAGGGCTCCATGTCTGACAGCGCCAACATTCTGGACGA
AGTGCCATTTCCTGCTCGGGTCCTGAAATCTTACTCAGTCGTCGAGGTAATCGCAGGCATCTCTGCCGTC
CTCGGGGGGATCATTGCCCTGAACGTGGATGACTCAGTTTCAGGCCCACACCTCTCAGTGACGTTCTTTT
GGATCCTAGTGGCCTGCTTTCCAAGTGCCATTGCCAGTCATGTGGCAGCAGAGTGTCCCAGCAAGTGTCT
GGTGGAGGTCCTGATTGCCATAAGCAGCCTCACGTCTCCGCTGCTGTTCACAGCCTCTGGATATCTGTCA
TTCAGCATCATGAGAATCGTGGAGATGTTTAAGGATTACCCGCCAGCCATAAAACCATCCTACGATGTGC
TGCTGCTGCTGCTGCTGCTAGTGCTCCTGCTGCAGGCCGGCCTCAACACGGGCACCGCCATCCAGTGCGT
GCGCTTCAAGGTCAGTGCAAGGCTGCAGGGTGCATCCTGGGACACCCAGAACGGCCCGCAGGAGCGCCTG
GCTGGGGAGGTGGCCAGGAGCCCCCTGAAGGAGTTCGACAAGGAGAAAGCCTGGAGAGCCGTCGTGGTGC
AAATGGCCCAGTGA

Translation (377 aa):
MTQEPFREELAYDRMPTLERGRQDPASYAPDAKPSDLQLSKRLPPCFSHKTWVFSVLMGSCLLVTSGFSL
YLGNVFPAEMDYLRCAAGSCIPSAIVSFTVSRRNANVIPNFQILFVSTFAVTTTCLIWFGCKLVLNPSAI
NINFNLILLLLLELLMAATVIIAARSSEEDCKKKKGSMSDSANILDEVPFPARVLKSYSVVEVIAGISAV
LGGIIALNVDDSVSGPHLSVTFFWILVACFPSAIASHVAAECPSKCLVEVLIAISSLTSPLLFTASGYLS
FSIMRIVEMFKDYPPAIKPSYDVLLLLLLLVLLLQAGLNTGTAIQCVRFKVSARLQGASWDTQNGPQERL
AGEVARSPLKEFDKEKAWRAVVVQMAQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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