NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32955.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32955.1 Public Homo sapiens 19 FCHO1 24 110 108 CCDS HistoryNCBI Gene:23149Re-query CCDS DB by CCDS ID:32955.1Re-query CCDS DB by GeneID:23149See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32955.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000600209.6 ENSP00000469075.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600209.6Link to Ensembl Protein Viewer:ENSP00000469075.2Re-query CCDS DB by Nucleotide ID:ENST00000600209Re-query CCDS DB by Protein ID:ENSP00000469075
Original member Current member EBI ENST00000600676.5 ENSP00000470493.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000600676.5Link to Ensembl Protein Viewer:ENSP00000470493.1Re-query CCDS DB by Nucleotide ID:ENST00000600676Re-query CCDS DB by Protein ID:ENSP00000470493
Original member Current member EBI ENST00000596309.6 ENSP00000470511.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000596309.6Link to Ensembl Protein Viewer:ENSP00000470511.2Re-query CCDS DB by Nucleotide ID:ENST00000596309Re-query CCDS DB by Protein ID:ENSP00000470511
Original member Current member EBI ENST00000596536.6 ENSP00000470731.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000596536.6Link to Ensembl Protein Viewer:ENSP00000470731.1Re-query CCDS DB by Nucleotide ID:ENST00000596536Re-query CCDS DB by Protein ID:ENSP00000470731
Original member Current member EBI ENST00000596951.6 ENSP00000472417.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000596951.6Link to Ensembl Protein Viewer:ENSP00000472417.1Re-query CCDS DB by Nucleotide ID:ENST00000596951Re-query CCDS DB by Protein ID:ENSP00000472417
Original member Current member EBI ENST00000699176.1 ENSP00000514179.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699176.1Link to Ensembl Protein Viewer:ENSP00000514179.1Re-query CCDS DB by Nucleotide ID:ENST00000699176Re-query CCDS DB by Protein ID:ENSP00000514179
Original member Current member EBI ENST00000699177.1 ENSP00000514180.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699177.1Link to Ensembl Protein Viewer:ENSP00000514180.1Re-query CCDS DB by Nucleotide ID:ENST00000699177Re-query CCDS DB by Protein ID:ENSP00000514180
Original member Current member EBI ENST00000699207.1 ENSP00000514204.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699207.1Link to Ensembl Protein Viewer:ENSP00000514204.1Re-query CCDS DB by Nucleotide ID:ENST00000699207Re-query CCDS DB by Protein ID:ENSP00000514204
Original member Current member EBI ENST00000699209.1 ENSP00000514206.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699209.1Link to Ensembl Protein Viewer:ENSP00000514206.1Re-query CCDS DB by Nucleotide ID:ENST00000699209Re-query CCDS DB by Protein ID:ENSP00000514206
Original member Current member EBI ENST00000699215.1 ENSP00000514211.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000699215.1Link to Ensembl Protein Viewer:ENSP00000514211.1Re-query CCDS DB by Nucleotide ID:ENST00000699215Re-query CCDS DB by Protein ID:ENSP00000514211
Original member Current member NCBI NM_001161358.2 NP_001154830.1 Accepted alive Link to Nucleotide Sequence:NM_001161358.2Link to Protein Sequence:NP_001154830.1Re-query CCDS DB by Nucleotide ID:NM_001161358Re-query CCDS DB by Protein ID:NP_001154830Link to BLAST:NP_001154830.1
Original member Current member NCBI NM_001384370.1 NP_001371299.1 Accepted alive Link to Nucleotide Sequence:NM_001384370.1Link to Protein Sequence:NP_001371299.1Re-query CCDS DB by Nucleotide ID:NM_001384370Re-query CCDS DB by Protein ID:NP_001371299Link to BLAST:NP_001371299.1
Original member Current member NCBI NM_001384371.1 NP_001371300.1 Accepted alive Link to Nucleotide Sequence:NM_001384371.1Link to Protein Sequence:NP_001371300.1Re-query CCDS DB by Nucleotide ID:NM_001384371Re-query CCDS DB by Protein ID:NP_001371300Link to BLAST:NP_001371300.1
Original member Current member NCBI NM_001384372.1 NP_001371301.1 Accepted alive Link to Nucleotide Sequence:NM_001384372.1Link to Protein Sequence:NP_001371301.1Re-query CCDS DB by Nucleotide ID:NM_001384372Re-query CCDS DB by Protein ID:NP_001371301Link to BLAST:NP_001371301.1
Original member Current member NCBI NM_001384373.1 NP_001371302.1 Accepted alive Link to Nucleotide Sequence:NM_001384373.1Link to Protein Sequence:NP_001371302.1Re-query CCDS DB by Nucleotide ID:NM_001384373Re-query CCDS DB by Protein ID:NP_001371302Link to BLAST:NP_001371302.1
Original member Current member NCBI NM_001384374.1 NP_001371303.1 Accepted alive Link to Nucleotide Sequence:NM_001384374.1Link to Protein Sequence:NP_001371303.1Re-query CCDS DB by Nucleotide ID:NM_001384374Re-query CCDS DB by Protein ID:NP_001371303Link to BLAST:NP_001371303.1
Original member Current member NCBI NM_001384375.1 NP_001371304.1 Accepted alive Link to Nucleotide Sequence:NM_001384375.1Link to Protein Sequence:NP_001371304.1Re-query CCDS DB by Nucleotide ID:NM_001384375Re-query CCDS DB by Protein ID:NP_001371304Link to BLAST:NP_001371304.1
Original member Current member NCBI NM_001384376.1 NP_001371305.1 Accepted alive Link to Nucleotide Sequence:NM_001384376.1Link to Protein Sequence:NP_001371305.1Re-query CCDS DB by Nucleotide ID:NM_001384376Re-query CCDS DB by Protein ID:NP_001371305Link to BLAST:NP_001371305.1
Original member Current member NCBI NM_001384377.1 NP_001371306.1 Accepted alive Link to Nucleotide Sequence:NM_001384377.1Link to Protein Sequence:NP_001371306.1Re-query CCDS DB by Nucleotide ID:NM_001384377Re-query CCDS DB by Protein ID:NP_001371306Link to BLAST:NP_001371306.1
Original member Current member NCBI NM_001384378.1 NP_001371307.1 Accepted alive Link to Nucleotide Sequence:NM_001384378.1Link to Protein Sequence:NP_001371307.1Re-query CCDS DB by Nucleotide ID:NM_001384378Re-query CCDS DB by Protein ID:NP_001371307Link to BLAST:NP_001371307.1
Original member Current member NCBI NM_001384379.1 NP_001371308.1 Accepted alive Link to Nucleotide Sequence:NM_001384379.1Link to Protein Sequence:NP_001371308.1Re-query CCDS DB by Nucleotide ID:NM_001384379Re-query CCDS DB by Protein ID:NP_001371308Link to BLAST:NP_001371308.1
Original member Current member NCBI NM_001384380.1 NP_001371309.1 Accepted alive Link to Nucleotide Sequence:NM_001384380.1Link to Protein Sequence:NP_001371309.1Re-query CCDS DB by Nucleotide ID:NM_001384380Re-query CCDS DB by Protein ID:NP_001371309Link to BLAST:NP_001371309.1
Original member Current member NCBI NM_001384381.1 NP_001371310.1 Accepted alive Link to Nucleotide Sequence:NM_001384381.1Link to Protein Sequence:NP_001371310.1Re-query CCDS DB by Nucleotide ID:NM_001384381Re-query CCDS DB by Protein ID:NP_001371310Link to BLAST:NP_001371310.1
Original member Current member NCBI NM_015122.3 NP_055937.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015122.3Link to Protein Sequence:NP_055937.1Re-query CCDS DB by Nucleotide ID:NM_015122Re-query CCDS DB by Protein ID:NP_055937Link to BLAST:NP_055937.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001154830.1 889 O14526-1 889 100% 0 0
NP_001371299.1 889 O14526-1 889 100% 0 0
NP_001371300.1 889 O14526-1 889 100% 0 0
NP_001371301.1 889 O14526-1 889 100% 0 0
NP_001371302.1 889 O14526-1 889 100% 0 0
NP_001371303.1 889 O14526-1 889 100% 0 0
NP_001371304.1 889 O14526-1 889 100% 0 0
NP_001371305.1 889 O14526-1 889 100% 0 0
NP_001371306.1 889 O14526-1 889 100% 0 0
NP_001371307.1 889 O14526-1 889 100% 0 0
NP_001371308.1 889 O14526-1 889 100% 0 0
NP_001371309.1 889 O14526-1 889 100% 0 0
NP_001371310.1 889 O14526-1 889 100% 0 0
NP_055937.1 889 O14526-1 889 100% 0 0

Chromosomal Locations for CCDS 32955.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17755165 17755191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17762762 17762853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17764375 17764449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17766669 17766810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17770425 17770577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17770792 17770896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17772457 17772555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17772645 17772741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17774239 17774283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17774394 17774478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775056 17775080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775456 17775513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17775983 17776161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17776247 17776271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17776635 17776686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17778137 17778228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17778609 17778884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781231 17781343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781452 17781539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17781712 17781820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17783017 17783172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17784103 17784235 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17784725 17784924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17786574 17786629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17787682 17787846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17788284 17788306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2670 nt):
ATGTCGTATTTTGGGGAGCATTTTTGGGGCGAGAAAAATCATGGCTTTGAGGTCCTGTACCACAGCGTGA
AGCAGGGGCCCATCTCCACCAAGGAGCTGGCGGACTTCATCCGGGAGAGGGCCACCATCGAGGAGACCTA
CTCGAAGGCGATGGCGAAACTCTCCAAGCTGGCCAGCAACGGGACCCCCATGGGGACCTTCGCCCCGCTC
TGGGAGGTCTTCCGCGTCTCCTCGGACAAGCTGGCGCTGTGCCACCTGGAACTGACACGGAAGTTACAGG
ATCTCATCAAGGACGTTCTCCGCTACGGCGAGGAACAGCTCAAGACCCACAAGAAGTGCAAGGAGGAAGT
GGTGAGCACCTTGGATGCTGTGCAGGTACTCTCGGGCGTCAGCCAGCTCCTGCCCAAGTCCCGCGAGAAC
TACCTGAACCGTTGCATGGACCAGGAGCGGCTGCGGAGGGAGAGTACCAGCCAGAAGGAGATGGACAAGG
CGGAGACTAAAACCAAGAAGGCGGCAGAGAGCCTGCGGCGCTCAGTGGAAAAATACAACTCAGCCCGAGC
TGACTTTGAGCAGAAGATGCTGGACTCAGCCCTGCGCTTCCAAGCCATGGAGGAGACACACCTGAGGCAC
ATGAAGGCACTGCTGGGCTCATATGCTCACTCGGTGGAGGACACGCACGTGCAGATTGGGCAGGTGCATG
AGGAATTTAAGCAGAACATCGAGAACGTCAGCGTGGAGATGCTACTCAGGAAGTTTGCAGAGAGTAAGGG
CACAGGCCGGGAGAAGCCTGGACCTCTGGACTTCGAGGCATACAGTGCGGCTGCCCTGCAGGAAGCGATG
AAACGTTTGCGGGGAGCCAAGGCCTTTCGCCTTCCAGGACTAAGCCGGCGGGAGCGGGAGCCAGAGCCAC
CTGCAGCTGTAGATTTCCTGGAGCCCGATTCAGGGACATGTCCAGAGGTGGATGAAGAAGGTTTCACTGT
CCGGCCTGATGTGACCCAGAACAGCACGGCCGAGCCCTCCCGTTTCTCGTCCAGCGACTCCGACTTCGAC
GATGAAGAGCCCCGCAAGTTCTATGTGCACATCAAGCCTGCCCCGGCCCGGGCTCCAGCCTGCAGCCCCG
AGGCAGCAGCGGCACAGCTCAGGGCCACCGCGGGCAGCCTCATCCTTCCTCCTGGCCCAGGGGGCACCAT
GAAACGCCATTCTTCACGGGACGCTGCTGGGAAACCCCAGAGACCTCGGTCTGCCCCCAGAACCAGCAGC
TGTGCAGAGAGATTGCAGTCAGAGGAGCAGGTGTCCAAGAACCTCTTTGGGCCGCCCCTGGAGTCAGCCT
TTGACCACGAAGATTTTACAGGCTCTAGCAGCCTGGGCTTCACCTCCAGCCCCTCCCCTTTCTCCTCCTC
GTCGCCCGAAAACGTGGAGGATTCCGGCCTGGACTCTCCGTCCCACGCGGCACCTGGCCCCTCCCCAGAT
TCCTGGGTCCCCCGCCCAGGCACCCCGCAGAGCCCGCCCAGCTGTAGGGCGCCACCCCCAGAGGCCAGGG
GTATCCGGGCACCGCCTCTGCCAGACTCGCCGCAGCCCCTCGCCTCGTCTCCAGGCCCCTGGGGGCTGGA
GGCCTTGGCCGGAGGAGACCTGATGCCTGCACCTGCTGACCCCACAGCCAGGGAGGGCCTGGCAGCCCCA
CCCAGGAGACTTCGCTCTAGGAAGGTGTCCTGCCCTCTCACACGTAGCAATGGGGACCTGTCTCGTTCCC
TGAGCCCCTCCCCACTGGGCTCTTCAGCCGCCAGCACTGCCTTGGAACGGCCCAGCTTCTTATCCCAGAC
AGGACACGGAGTCTCCCGGGGTCCGAGCCCTGTGGTCCTGGGCTCCCAGGATGCCCTGCCCATAGCCACA
GCCTTCACAGAGTATGTCCACGCCTACTTCCGTGGCCACAGCCCCAGCTGCCTGGCTCGAGTAACTGGGG
AGCTGACCATGACCTTCCCTGCTGGCATCGTGCGTGTGTTCAGCGGGACCCCACCACCACCTGTCCTCAG
CTTCCGGCTTGTACACACAACCGCTATTGAGCACTTCCAGCCCAACGCCGATCTGCTGTTCAGTGACCCC
TCCCAGAGTGACCCTGAGACCAAAGACTTCTGGCTCAACATGGCAGCTCTGACCGAAGCCCTGCAGCGCC
AGGCAGAGCAGAACCCCACTGCCTCCTACTACAACGTGGTGCTGCTGCGATACCAGTTCTCCCGCCCGGG
TCCCCAGTCTGTGCCTCTGCAGCTCAGTGCCCACTGGCAGTGTGGAGCCACCCTCACCCAGGTCTCAGTG
GAGTACGGCTACCGGCCCGGTGCCACGGCTGTGCCCACACCACTCACGAACGTCCAGATCCTGCTGCCTG
TGGGGGAGCCTGTGACCAACGTCCGCTTGCAGCCGGCTGCCACCTGGAACCTGGAGGAGAAGCGGCTCAC
TTGGAGGCTTCCAGATGTGTCCGAGGCAGGCGGTTCTGGCCGCCTCTCTGCCAGCTGGGAGCCGCTCTCA
GGGCCCAGCACACCCAGCCCCGTGGCTGCACAGTTCACCAGCGAGGGGACCACTCTGTCGGGCGTGGACT
TGGAACTGGTGGGCAGCGGTTACCGCATGTCGCTGGTGAAGAGGAGGTTTGCCACAGGGATGTACCTGGT
GAGCTGCTGA

Translation (889 aa):
MSYFGEHFWGEKNHGFEVLYHSVKQGPISTKELADFIRERATIEETYSKAMAKLSKLASNGTPMGTFAPL
WEVFRVSSDKLALCHLELTRKLQDLIKDVLRYGEEQLKTHKKCKEEVVSTLDAVQVLSGVSQLLPKSREN
YLNRCMDQERLRRESTSQKEMDKAETKTKKAAESLRRSVEKYNSARADFEQKMLDSALRFQAMEETHLRH
MKALLGSYAHSVEDTHVQIGQVHEEFKQNIENVSVEMLLRKFAESKGTGREKPGPLDFEAYSAAALQEAM
KRLRGAKAFRLPGLSRREREPEPPAAVDFLEPDSGTCPEVDEEGFTVRPDVTQNSTAEPSRFSSSDSDFD
DEEPRKFYVHIKPAPARAPACSPEAAAAQLRATAGSLILPPGPGGTMKRHSSRDAAGKPQRPRSAPRTSS
CAERLQSEEQVSKNLFGPPLESAFDHEDFTGSSSLGFTSSPSPFSSSSPENVEDSGLDSPSHAAPGPSPD
SWVPRPGTPQSPPSCRAPPPEARGIRAPPLPDSPQPLASSPGPWGLEALAGGDLMPAPADPTAREGLAAP
PRRLRSRKVSCPLTRSNGDLSRSLSPSPLGSSAASTALERPSFLSQTGHGVSRGPSPVVLGSQDALPIAT
AFTEYVHAYFRGHSPSCLARVTGELTMTFPAGIVRVFSGTPPPPVLSFRLVHTTAIEHFQPNADLLFSDP
SQSDPETKDFWLNMAALTEALQRQAEQNPTASYYNVVLLRYQFSRPGPQSVPLQLSAHWQCGATLTQVSV
EYGYRPGATAVPTPLTNVQILLPVGEPVTNVRLQPAATWNLEEKRLTWRLPDVSEAGGSGRLSASWEPLS
GPSTPSPVAAQFTSEGTTLSGVDLELVGSGYRMSLVKRRFATGMYLVSC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH