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Report for CCDS1276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1276.1 Public Homo sapiens 1 ATP1B1 24 110 108 CCDS HistoryNCBI Gene:481Re-query CCDS DB by CCDS ID:1276.1Re-query CCDS DB by GeneID:481See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367815.9 ENSP00000356789.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367815.9Link to Ensembl Protein Viewer:ENSP00000356789.3Re-query CCDS DB by Nucleotide ID:ENST00000367815Re-query CCDS DB by Protein ID:ENSP00000356789
Original member Current member EBI ENST00000367816.5 ENSP00000356790.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367816.5Link to Ensembl Protein Viewer:ENSP00000356790.1Re-query CCDS DB by Nucleotide ID:ENST00000367816Re-query CCDS DB by Protein ID:ENSP00000356790
Original member Current member EBI ENST00000689522.1 ENSP00000509039.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689522.1Link to Ensembl Protein Viewer:ENSP00000509039.1Re-query CCDS DB by Nucleotide ID:ENST00000689522Re-query CCDS DB by Protein ID:ENSP00000509039
Original member Current member EBI ENST00000690184.1 ENSP00000509517.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690184.1Link to Ensembl Protein Viewer:ENSP00000509517.1Re-query CCDS DB by Nucleotide ID:ENST00000690184Re-query CCDS DB by Protein ID:ENSP00000509517
Original member Current member NCBI NM_001677.4 NP_001668.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001677.4Link to Protein Sequence:NP_001668.1Re-query CCDS DB by Nucleotide ID:NM_001677Re-query CCDS DB by Protein ID:NP_001668Link to BLAST:NP_001668.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001668.1 303 P05026-1 303 100% 0 0

Chromosomal Locations for CCDS 1276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 169106830 169106926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169111370 169111498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169124884 169125039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169127224 169127408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169130010 169130090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169131292 169131555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGCCCGCGGGAAAGCCAAGGAGGAGGGCAGCTGGAAGAAATTCATCTGGAACTCAGAGAAGAAGGAGT
TT
CTGGGCAGGACCGGTGGCAGTTGGTTTAAGATCCTTCTATTCTACGTAATATTTTATGGCTGCCTGGC
T
GGCATCTTCATCGGAACCATCCAAGTGATGCTGCTCACCATCAGTGAATTTAAGCCCACATATCAGGAC
CGA
GTGGCCCCGCCAGGATTAACACAGATTCCTCAGATCCAGAAGACTGAAATTTCCTTTCGTCCTAATG
AT
CCCAAGAGCTATGAGGCATATGTACTGAACATAGTTAGGTTCCTGGAAAAGTACAAAGATTCAGCCCA
G
AGGGATGACATGATTTTTGAAGATTGTGGCGATGTGCCCAGTGAACCGAAAGAACGAGGAGACTTTAAT
CAT
GAACGAGGAGAGCGAAAGGTCTGCAGATTCAAGCTTGAATGGCTGGGAAATTGCTCTGGATTAAATG
AT
GAAACTTATGGCTACAAAGAGGGCAAACCGTGCATTATTATAAAGCTCAACCGAGTTCTAGGCTTCAA
A
CCTAAGCCTCCCAAGAATGAGTCCTTGGAGACTTACCCAGTGATGAAGTATAACCCAAATGTCCTTCCC
GTT
CAGTGCACTGGCAAGCGAGATGAAGATAAGGATAAAGTTGGAAATGTGGAGTATTTTGGACTGGGCA
AC
TCCCCTGGTTTTCCTCTGCAGTATTATCCGTACTATGGCAAACTCCTGCAGCCCAAATACCTGCAGCC
C
CTGCTGGCCGTACAGTTCACCAATCTTACCATGGACACTGAAATTCGCATAGAGTGTAAGGCGTACGGT
GAG
AACATTGGGTACAGTGAGAAAGACCGTTTTCAGGGACGTTTTGATGTAAAAATTGAAGTTAAGAGCT
GA


Translation (303 aa):
MARGKAKEEGSWKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQD
R
VAPP
GLTQIPQIQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFEDCGDVPSEPKERGDFN
H
ERGERKVCRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNRVLGFKPK
PPKNESLETYPVMKYNPNVLP
V
QCTGK
RDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYG
E
NIGYSEKDRFQGRFDVKIEVKS




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
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