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Report for CCDS31089.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31089.1 Public Homo sapiens 1 ZNF124 24 110 108 CCDS HistoryNCBI Gene:7678Re-query CCDS DB by CCDS ID:31089.1Re-query CCDS DB by GeneID:7678See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31089.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340684.10 ENSP00000340749.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000340684.10Link to Ensembl Protein Viewer:ENSP00000340749.6Re-query CCDS DB by Nucleotide ID:ENST00000340684Re-query CCDS DB by Protein ID:ENSP00000340749
Original member Current member NCBI NM_003431.5 NP_003422.2 Accepted alive Link to Nucleotide Sequence:NM_003431.5Link to Protein Sequence:NP_003422.2Re-query CCDS DB by Nucleotide ID:NM_003431Re-query CCDS DB by Protein ID:NP_003422Link to BLAST:NP_003422.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003422.2 289 Q15973-4 289 100% 0 0

Chromosomal Locations for CCDS 31089.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 247156566 247157217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247159006 247159066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247159687 247159813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 247171848 247171877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (870 nt):
ATGTCGGGACACCCCGGAAGCTGGGAAATGAACTCGGTTGCCTTTGAGGATGTGGCTGTGAACTTCACCC
AGGAGGAGTGGGCTTTGTTGGATCCTTCCCAGAAGAATCTCTATAGAGACGTGATGCAGGAAACCTTCAG
GAATCTGGCTTCCATAGGAAACAAAGGGGAAGACCAGAGCATTGAAGATCAGTACAAAAATTCTTCAAGA
AATCTAAGTTCATTTCAGATACATCAGAGAAATCACACTGGAGAGAAACCCTATGAATGTATGGAATGTG
GGAAAGCCTTAGGTTTTTCCCGTTCTCTTAATAGACATAAAAGGATTCACACTGGAGAAAAACGCTATGA
ATGTAAGCAATGTGGGAAAGCCTTCAGTCGTTCCAGTCACCTTCGTGACCATGAAAGAACTCATACTGGA
GAGAAACCCTATGAATGTAAGCACTGTGGGAAAGCCTTCCGTTACTCCAATTGCCTTCATTACCATGAAA
GAACTCACACTGGAGAGAAACCTTATGTGTGCATGGAATGTGGCAAAGCTTTCAGTTGTCTCAGTTCCTT
GCAAGGACATATAAAGGCTCATGCTGGTGAAGAACCCTATCCATGTAAGCAATGTGGGAAAGCCTTCAGA
TACGCCAGTTCCCTTCAGAAACACGAGAAAACTCATATTGCACAGAAACCCTATGTATGTAACAATTGTG
GTAAAGGCTTCAGATGTTCCAGTTCCCTTCGTGACCATGAAAGGACTCATACTGGAGAGAAACCCTATGA
ATGTCAGAAATGTGGCAAAGCCTTTAGTCGTGCTAGTACCCTTTGGAAGCATAAAAAAACTCATACTGGA
GAAAAGCCCTATAAATGTAAAAAAATGTAA

Translation (289 aa):
MSGHPGSWEMNSVAFEDVAVNFTQEEWALLDPSQKNLYRDVMQETFRNLASIGNKGEDQSIEDQYKNSSR
NLSSFQIHQRNHTGEKPYECMECGKALGFSRSLNRHKRIHTGEKRYECKQCGKAFSRSSHLRDHERTHTG
EKPYECKHCGKAFRYSNCLHYHERTHTGEKPYVCMECGKAFSCLSSLQGHIKAHAGEEPYPCKQCGKAFR
YASSLQKHEKTHIAQKPYVCNNCGKGFRCSSSLRDHERTHTGEKPYECQKCGKAFSRASTLWKHKKTHTG
EKPYKCKKM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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