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Report for CCDS76050.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76050.1 Public Homo sapiens X MAGEA6 24 110 108 CCDS HistoryNCBI Gene:4105Re-query CCDS DB by CCDS ID:76050.1Re-query CCDS DB by GeneID:4105See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76050.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000329342.10 ENSP00000329199.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000329342.10Link to Ensembl Protein Viewer:ENSP00000329199.5Re-query CCDS DB by Nucleotide ID:ENST00000329342Re-query CCDS DB by Protein ID:ENSP00000329199
Original member Current member EBI ENST00000616035.4 ENSP00000480637.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616035.4Link to Ensembl Protein Viewer:ENSP00000480637.1Re-query CCDS DB by Nucleotide ID:ENST00000616035Re-query CCDS DB by Protein ID:ENSP00000480637
Original member Current member NCBI NM_005363.5 NP_005354.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005363.5Link to Protein Sequence:NP_005354.1Re-query CCDS DB by Nucleotide ID:NM_005363Re-query CCDS DB by Protein ID:NP_005354Link to BLAST:NP_005354.1
Original member Current member NCBI NM_175868.4 NP_787064.1 Accepted alive Link to Nucleotide Sequence:NM_175868.4Link to Protein Sequence:NP_787064.1Re-query CCDS DB by Nucleotide ID:NM_175868Re-query CCDS DB by Protein ID:NP_787064Link to BLAST:NP_787064.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005354.1 314 P43360 314 100% 0 0
NP_787064.1 314 P43360 314 100% 0 0

Chromosomal Locations for CCDS 76050.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152766706 152767650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGCCTCTTGAGCAGAGGAGTCAGCACTGCAAGCCTGAAGAAGGCCTTGAGGCCCGAGGAGAGGCCCTGG
GCCTGGTGGGTGCGCAGGCTCCTGCTACTGAGGAGCAGGAGGCTGCCTCCTCCTCTTCTACTCTAGTTGA
AGTCACCCTGGGGGAGGTGCCTGCTGCCGAGTCACCAGATCCTCCCCAGAGTCCTCAGGGAGCCTCCAGC
CTCCCCACTACCATGAACTACCCTCTCTGGAGCCAATCCTATGAGGACTCCAGCAACCAAGAAGAGGAGG
GGCCAAGCACCTTCCCTGACCTGGAGTCTGAGTTCCAAGCAGCACTCAGTAGGAAGGTGGCCAAGTTGGT
TCATTTTCTGCTCCTCAAGTATCGAGCCAGGGAGCCGGTCACAAAGGCAGAAATGCTGGGGAGTGTCGTC
GGAAATTGGCAGTACTTCTTTCCTGTGATCTTCAGCAAAGCTTCCGATTCCTTGCAGCTGGTCTTTGGCA
TCGAGCTGATGGAAGTGGACCCCATCGGCCACGTGTACATCTTTGCCACCTGCCTGGGCCTCTCCTACGA
TGGCCTGCTGGGTGACAATCAGATCATGCCCAAGACAGGCTTCCTGATAATCATCCTGGCCATAATCGCA
AAAGAGGGCGACTGTGCCCCTGAGGAGAAAATCTGGGAGGAGCTGAGTGTGTTAGAGGTGTTTGAGGGGA
GGGAAGACAGTATCTTCGGGGATCCCAAGAAGCTGCTCACCCAATATTTCGTGCAGGAAAACTACCTGGA
GTACCGGCAGGTCCCCGGCAGTGATCCTGCATGCTATGAGTTCCTGTGGGGTCCAAGGGCCCTCATTGAA
ACCAGCTATGTGAAAGTCCTGCACCATATGGTAAAGATCAGTGGAGGACCTCGCATTTCCTACCCACTCC
TGCATGAGTGGGCTTTGAGAGAGGGGGAAGAGTGA

Translation (314 aa):
MPLEQRSQHCKPEEGLEARGEALGLVGAQAPATEEQEAASSSSTLVEVTLGEVPAAESPDPPQSPQGASS
LPTTMNYPLWSQSYEDSSNQEEEGPSTFPDLESEFQAALSRKVAKLVHFLLLKYRAREPVTKAEMLGSVV
GNWQYFFPVIFSKASDSLQLVFGIELMEVDPIGHVYIFATCLGLSYDGLLGDNQIMPKTGFLIIILAIIA
KEGDCAPEEKIWEELSVLEVFEGREDSIFGDPKKLLTQYFVQENYLEYRQVPGSDPACYEFLWGPRALIE
TSYVKVLHHMVKISGGPRISYPLLHEWALREGEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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