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Report for CCDS8221.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8221.1 Public Homo sapiens 11 ARHGEF17 24 110 108 CCDS HistoryNCBI Gene:9828Re-query CCDS DB by CCDS ID:8221.1Re-query CCDS DB by GeneID:9828See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8221.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263674.4 ENSP00000263674.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263674.4Link to Ensembl Protein Viewer:ENSP00000263674.3Re-query CCDS DB by Nucleotide ID:ENST00000263674Re-query CCDS DB by Protein ID:ENSP00000263674
Original member Current member NCBI NM_014786.4 NP_055601.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014786.4Link to Protein Sequence:NP_055601.2Re-query CCDS DB by Nucleotide ID:NM_014786Re-query CCDS DB by Protein ID:NP_055601Link to BLAST:NP_055601.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055601.2 2063 Q96PE2 2063 100% 0 0

Chromosomal Locations for CCDS 8221.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 73308639 73311830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73346883 73346960 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73352830 73353012 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73355533 73355649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73355861 73355953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73356175 73356351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73356709 73356759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73357025 73357134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73357242 73357327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73359834 73359952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73360320 73360533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73361088 73361161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73362040 73362239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73362433 73362734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73363206 73363455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73363747 73363833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73364172 73364239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73364452 73364600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73365390 73365564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73365678 73365947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 73367584 73367780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (6192 nt):
ATGGCGGACGGGGCACCCCGGCCCCAGCTTTACCGCAGCGTCTCGTTCAAGCTGCTGGAGCGCTGGAGCG
GCGGCCCCGGGCTGAGGGAGGAGGACACGGACACCCCCGGCTTGAGGCGACGCGCCTCGTGCCGGCCGAC
CACGGCTGCCCGGGGCCAGCCCTCTCGGCGCGTGTCCAAGCTGGCGTCTGGGCCCCTGGCCGCCCCCGCG
CAGCCGCGCCCGCTCCGCAGCCTCTCGCCGTCGGTTCGCCAGCTCTCCCGGCGCTTCGACGCGCCGCGTC
TGGACGACGGCTCCGCTGGGACCCGAGACGGAGGCGTCTTACCCGCGGCCGCGGAAGAAGCGGCCGAGGG
CCCAGCGCGAGGAGCCTGGCCCAGCGTCACCGAGATGCGCAAGCTCTTCGGCGGTCCTGGCTCCAGGAGG
CCCAGCGCCGACTCTGAATCCCCAGGAACGCCCAGCCCCGACGGTGCCGCGTGGGAGCCTCCGGCTCGGG
AGTCGCGGCAGCCACCGACGCCACCCCCTCGGACATGCTTCCCCCTGGCGGGTCTGCGTTCGGCGCGGCC
CCTGACCGGGCCGGAGACCGAAGGGAGGCTGCGCCGGCCGCAGCAGCAACAGGAGCGGGCGCAGCGTCCA
GCGGATGGTTTACATTCTTGGCATATCTTCTCCCAACCGCAGGCCGGGGCCCGGGCCTCCTGCTCCTCCT
CCTCCATCGCCGCCTCCTATCCTGTCAGCCGCAGTCGTGCTGCCAGCTCCAGCGAGGAGGAAGAGGAGGG
CCCGCCGCAGCTGCCTGGAGCCCAGAGTCCGGCCTACCACGGCGGCCACTCCTCGGGCAGTGACGACGAC
CGAGACGGTGAGGGCGGCCACCGCTGGGGAGGGAGGCCCGGGCTCAGGCCTGGAAGCTCCCTATTGGATC
AGGACTGCAGGCCTGACAGTGATGGGTTAAATCTAAGCAGCATGAACTCAGCAGGGGTTTCTGGGAGCCC
TGAGCCCCCAACATCTCCAAGAGCCCCTAGAGAAGAAGGACTCCGGGAGTGGGGTAGTGGCTCTCCGCCC
TGCGTCCCAGGTCCCCAGGAGGGACTTCGGCCTATGTCTGACTCTGTGGGAGGAGCTTTCCGTGTGGCCA
AGGTGAGCTTTCCCTCGTACCTGGCCAGCCCCGCAGGCTCCCGCGGTAGCAGCCGTTATTCCAGCACGGA
GACCCTCAAGGACGACGACCTATGGTCTAGTAGGGGTTCTGGGGGCTGGGGCGTGTACCGCTCCCCTAGC
TTTGGAGCTGGGGAAGGGCTCCTGCGGTCCCAGGCTCGAACCCGTGCCAAAGGACCTGGAGGCACCTCTA
GGGCATTGAGGGATGGAGGATTTGAGCCTGAAAAGAGTCGACAGCGGAAGTCCCTGTCAAATCCAGATAT
CGCCTCAGAGACCCTGACGCTTCTCAGTTTCCTGCGCTCAGACCTTTCAGAGCTGAGGGTCCGAAAACCT
GGTGGGAGCTCCGGGGACCGTGGAAGCAACCCCCTAGATGGCAGAGACTCACCATCCGCAGGTGGCCCTG
TGGGGCAACTTGAACCCATACCCATCCCAGCCCCAGCATCACCTGGCACGCGCCCCACACTCAAGGACTT
GACAGCCACTCTGCGGAGAGCAAAGTCATTCACCTGCTCTGAGAAGCCCATGGCCCGCCGCCTGCCCCGC
ACCAGTGCTCTGAAGTCCAGCTCCTCCGAGCTCCTGCTCACAGGCCCTGGTGCCGAGGAGGATCCGCTGC
CCCTCATCGTCCAGGACCAATATGTGCAGGAGGCCCGCCAGGTTTTTGAGAAGATCCAGCGCATGGGTGC
CCAACAAGATGATGGAAGCGATGCCCCCCCTGGAAGCCCTGACTGGGCAGGGGATGTGACCCGAGGGCAG
CGGTCCCAGGAGGAGCTCTCAGGCCCTGAGTCCAGTCTGACAGATGAAGGCATTGGGGCAGACCCTGAGC
CTCCTGTTGCAGCATTTTGCGGCCTGGGTACCACAGGGATGTGGCGACCTCTTTCCTCATCCTCGGCCCA
GACGAACCACCATGGCCCTGGGACTGAGGACAGTCTGGGCGGGTGGGCCCTGGTGTCGCCTGAGACCCCT
CCCACACCAGGTGCCCTCCGCCGACGACGCAAAGTCCCACCTTCAGGTTCTGGTGGGAGCGAATTGAGCA
ATGGGGAGGCAGGGGAGGCCTACAGGTCCCTGAGTGACCCAATTCCTCAGCGCCACCGGGCTGCCACCTC
TGAAGAGCCTACTGGGTTCTCTGTGGACAGCAACCTCCTGGGCTCACTGAGCCCCAAGACAGGGCTCCCT
GCCACCTCAGCCATGGATGAGGGCTTGACCAGTGGTCACAGTGACTGGTCTGTGGGCAGTGAAGAGAGCA
AGGGATATCAGGAGGTTATTCAGAGCATAGTTCAGGGGCCTGGCACCCTGGGGCGTGTGGTGGACGACAG
GATTGCTGGCAAAGCCCCCAAGAAGAAATCCCTGAGTGACCCCAGCCGCCGTGGGGAGCTGGCTGGGCCT
GGATTCGAGGGCCCTGGAGGGGAGCCCATCCGAGAAGTTGAGCCCATGCTGCCTCCATCCAGCAGCGAGC
CCATCCTTGTAGAGCAGCGGGCAGAGCCAGAAGAACCTGGTGCCACCAGGAGCCGGGCACAGTCTGAAAG
GGCCCTACCTGAGGCTCTGCCTCCCCCTGCCACTGCCCACCGAAACTTTCACCTTGACCCCAAGCTGGCT
GACATTCTGTCCCCGAGGCTAATCCGCCGAGGCTCCAAGAAGCGCCCAGCTCGGAGTAGTCACCAGGAGC
TTCGGAGAGACGAGGGCAGTCAGGACCAGACTGGCAGCCTGTCTCGGGCCCGGCCCTCCTCCAGACACGT
TCGCCATGCCAGTGTGCCCGCCACATTTATGCCTATTGTGGTGCCTGAGCCACCAACTTCTGTTGGTCCC
CCTGTGGCTGTGCCAGAACCCATAGGCTTCCCTACCCGAGCCCATCCCACGTTGCAGGCACCATCGCTCG
AGGACGTCACCAAGCAGTACATGCTGAACCTGCACTCCGGTGAGGTCCCTGCCCCAGTGCCAGTGGACAT
GCCCTGCTTGCCTCTGGCTGCACCGCCCTCTGCTGAGGCCAAGCCCCCTGAGGCAGCTCGGCCTGCAGAT
GAGCCTACCCCTGCCAGCAAGTGCTGCAGCAAGCCACAGGTGGACATGCGGAAGCACGTGGCCATGACCC
TGCTGGACACAGAGCAGTCGTATGTGGAGTCGCTGCGCACCCTGATGCAGGGCTACATGCAGCCGCTGAA
GCAGCCAGAGAACTCCGTGCTCTGTGACCCTTCACTGGTGGACGAGATCTTCGACCAGATCCCCGAGCTC
CTGGAGCACCACGAGCAATTCCTGGAGCAGGTTCGGCACTGCATGCAGACCTGGCATGCCCAGCAGAAGG
TGGGAGCCCTGCTCGTCCAGTCGTTCTCCAAGGATGTCCTAGTAAACATCTATTCTGCCTATATCGATAA
CTTCCTCAATGCAAAGGATGCTGTGCGTGTGGCCAAGGAGGCGAGGCCTGCCTTTCTCAAGTTCCTAGAG
CAAAGCATGCGTGAGAACAAGGAGAAGCAGGCGCTGTCTGACCTCATGATCAAGCCTGTGCAGCGGATCC
CACGCTACGAGCTTCTGGTGAAGGACCTCCTGAAGCATACACCTGAGGACCACCCGGACCATCCACTCCT
GCTGGAGGCGCAGCGGAACATCAAGCAGGTGGCTGAGCGCATCAACAAGGGTGTGCGGAGTGCCGAGGAG
GCGGAGCGCCATGCCCGTGTGCTGCAGGAGATAGAGGCTCACATCGAGGGCATGGAGGATCTCCAGGCCC
CTCTGCGGCGGTTCCTGAGACAGGAGATGGTCATTGAAGTGAAGGCGATCGGTGGCAAGAAGGACCGGTC
TCTCTTCCTGTTCACGGACCTCATCGTCTGCACCACTCTGAAGCGAAAGTCAGGCTCCCTGCGGCGCAGC
TCCATGAGCCTGTACACGGCAGCCAGTGTCATTGACACAGCCAGCAAGTACAAGATGCTGTGGAAGCTGC
CGCTGGAAGACGCAGACATCATCAAAGGGGCATCCCAAGCCACCAATCGGGAGAACATCCAGAAGGCCAT
CAGCCGCCTTGATGAGGACCTCACCACCCTGGGCCAAATGAGCAAGCTCTCTGAGAGCCTTGGTTTCCCC
CACCAGAGCCTGGACGATGCACTGCGGGACCTCTCAGCTGCCATGCACCGGGACCTGTCGGAGAAGCAGG
CGCTGTGCTACGCGCTTTCCTTCCCGCCAACCAAGCTGGAGCTGTGCGCCACTCGGCCCGAGGGCACCGA
CTCCTACATTTTTGAGTTCCCTCACCCTGACGCCCGCCTTGGTTTTGAACAGGCCTTCGATGAGGCCAAG
AGGAAGCTGGCATCCAGCAAAAGCTGTCTAGACCCTGAGTTCCTGAAGGCCATCCCCATCATGAAAACCC
GCAGTGGCATGCAGTTCTCCTGTGCGGCTCCCACCCTGAACAGCTGCCCGGAGCCCTCGCCTGAGGTATG
GGTCTGCAACAGCGACGGCTACGTGGGCCAGGTGTGCCTGCTGAGCCTGCGCGCCGAGCCGGACGTGGAG
GCCTGCATCGCCGTCTGTTCCGCCCGCATCCTCTGCATCGGGGCGGTGCCCGGGCTGCAGCCTCGCTGCC
ACCGGGAGCCTCCTCCGTCGCTGAGGAGTCCTCCAGAGACGGCACCGGAGCCCGCCGGGCCGGAGCTGGA
CGTCGAGGCCGCTGCAGACGAGGAAGCCGCGACGCTCGCGGAGCCGGGGCCGCAGCCCTGCCTTCACATC
TCCATTGCAGGCTCGGGCTTGGAGATGACGCCGGGCCTCGGCGAGGGTGACCCCCGCCCAGAGCTGGTGC
CCTTTGACAGTGACTCTGACGATGAGTCTTCGCCCAGCCCCTCGGGGACGCTGCAGAGCCAGGCCAGCCG
GTCCACCATCTCCTCCAGCTTTGGCAATGAGGAGACCCCGAGTTCCAAGGAGGCCACGGCAGAGACCACC
AGCTCAGAGGAGGAGCAGGAGCCAGGCTTCCTGCCACTGTCTGGCTCCTTTGGGCCTGGTGGTCCCTGCG
GCACCAGCCCAATGGATGGGAGAGCCCTTCGCCGCTCCAGCCACGGCTCCTTCACCCGGGGCAGCCTTGA
GGACCTGCTGAGTGTCGACCCTGAGGCCTACCAGAGCTCCGTGTGGCTGGGCACTGAGGATGGCTGTGTC
CACGTGTACCAGTCCTCCGACAGCATCCGTGACCGCAGGAACAGCATGAAGCTCCAGCATGCGGCCTCTG
TGACCTGCATCTTGTATCTGAATAACCAGGTGTTTGTGTCTCTGGCCAATGGAGAGCTTGTGGTCTACCA
AAGGGAAGCAGGCCATTTCTGGGACCCCCAGAACTTCAAATCAGTGACCTTGGGCACCCAGGGGAGCCCC
ATCACCAAGATGGTATCTGTGGGTGGGCGGCTGTGGTGTGGCTGCCAGAACCGAGTCCTTGTCCTGAGCC
CTGACACGCTGCAGCTGGAGCACATGTTTTACGTGGGTCAGGATTCAAGCCGCTGCGTGGCTTGCATGGT
GGACTCCAGCCTGGGTGTGTGGGTGACATTGAAAGGTAGTGCCCACGTGTGTCTCTACCATCCAGACACC
TTTGAGCAGCTGGCAGAAGTAGACGTCACTCCTCCCGTGCACAGGATGCTGGCAGGCTCGGATGCCATCA
TCCGGCAGCACAAGGCTGCCTGTCTGCGAATCACAGCGCTGCTGGTGTGTGAGGAGCTGCTGTGGGTGGG
CACCAGTGCTGGTGTCGTCCTCACCATGCCCACTTCGCCCGGTACTGTCAGCTGCCCACGGGCACCACTC
AGTCCCACAGGCCTCGGCCAGGGACACACCGGCCACGTCCGCTTCTTGGCTGCAGTCCAGCTGCCAGATG
GCTTCAACCTGCTCTGCCCAACCCCACCACCTCCCCCAGACACAGGCCCCGAGAAGCTGCCATCACTGGA
GCACCGGGACTCCCCTTGGCACCGAGGCCCCGCCCCTGCCAGGCCTAAAATGCTGGTTATCAGTGGAGGT
GATGGCTATGAGGACTTCCGACTCAGCAGTGGGGGCGGCAGCAGCAGTGAGACTGTGGGTCGAGACGACA
GCACAAACCACCTCCTCCTGTGGAGGGTGTGA

Translation (2063 aa):
MADGAPRPQLYRSVSFKLLERWSGGPGLREEDTDTPGLRRRASCRPTTAARGQPSRRVSKLASGPLAAPA
QPRPLRSLSPSVRQLSRRFDAPRLDDGSAGTRDGGVLPAAAEEAAEGPARGAWPSVTEMRKLFGGPGSRR
PSADSESPGTPSPDGAAWEPPARESRQPPTPPPRTCFPLAGLRSARPLTGPETEGRLRRPQQQQERAQRP
ADGLHSWHIFSQPQAGARASCSSSSIAASYPVSRSRAASSSEEEEEGPPQLPGAQSPAYHGGHSSGSDDD
RDGEGGHRWGGRPGLRPGSSLLDQDCRPDSDGLNLSSMNSAGVSGSPEPPTSPRAPREEGLREWGSGSPP
CVPGPQEGLRPMSDSVGGAFRVAKVSFPSYLASPAGSRGSSRYSSTETLKDDDLWSSRGSGGWGVYRSPS
FGAGEGLLRSQARTRAKGPGGTSRALRDGGFEPEKSRQRKSLSNPDIASETLTLLSFLRSDLSELRVRKP
GGSSGDRGSNPLDGRDSPSAGGPVGQLEPIPIPAPASPGTRPTLKDLTATLRRAKSFTCSEKPMARRLPR
TSALKSSSSELLLTGPGAEEDPLPLIVQDQYVQEARQVFEKIQRMGAQQDDGSDAPPGSPDWAGDVTRGQ
RSQEELSGPESSLTDEGIGADPEPPVAAFCGLGTTGMWRPLSSSSAQTNHHGPGTEDSLGGWALVSPETP
PTPGALRRRRKVPPSGSGGSELSNGEAGEAYRSLSDPIPQRHRAATSEEPTGFSVDSNLLGSLSPKTGLP
ATSAMDEGLTSGHSDWSVGSEESKGYQEVIQSIVQGPGTLGRVVDDRIAGKAPKKKSLSDPSRRGELAGP
GFEGPGGEPIREVEPMLPPSSSEPILVEQRAEPEEPGATRSRAQSERALPEALPPPATAHRNFHLDPKLA
DILSPRLIRRGSKKRPARSSHQELRRDEGSQDQTGSLSRARPSSRHVRHASVPATFMPIVVPEPPTSVGP
PVAVPEPIGFPTRAHPTLQAPSLEDVTKQYMLNLHSGEVPAPVPVDMPCLPLAAPPSAEAKPPEAARPAD
EPTPASKCCSKPQVDMRKHVAMTLLDTEQSYVESLRTLMQGYMQPLKQPENSVLCDPSLVDEIFDQIPEL
LEHHEQFLEQVRHCMQTWHAQQKVGALLVQSFSKDVLVNIYSAYIDNFLNAKDAVRVAKEARPAFLKFLE
QSMRENKEKQALSDLMIKPVQRIPRYELLVKDLLKHTPEDHPDHPLLLEAQRNIKQVAERINKGVRSAEE
AERHARVLQEIEAHIEGMEDLQAPLRRFLRQEMVIEVKAIGGKKDRSLFLFTDLIVCTTLKRKSGSLRRS
SMSLYTAASVIDTASKYKMLWKLPLEDADIIKGASQATNRENIQKAISRLDEDLTTLGQMSKLSESLGFP
HQSLDDALRDLSAAMHRDLSEKQALCYALSFPPTKLELCATRPEGTDSYIFEFPHPDARLGFEQAFDEAK
RKLASSKSCLDPEFLKAIPIMKTRSGMQFSCAAPTLNSCPEPSPEVWVCNSDGYVGQVCLLSLRAEPDVE
ACIAVCSARILCIGAVPGLQPRCHREPPPSLRSPPETAPEPAGPELDVEAAADEEAATLAEPGPQPCLHI
SIAGSGLEMTPGLGEGDPRPELVPFDSDSDDESSPSPSGTLQSQASRSTISSSFGNEETPSSKEATAETT
SSEEEQEPGFLPLSGSFGPGGPCGTSPMDGRALRRSSHGSFTRGSLEDLLSVDPEAYQSSVWLGTEDGCV
HVYQSSDSIRDRRNSMKLQHAASVTCILYLNNQVFVSLANGELVVYQREAGHFWDPQNFKSVTLGTQGSP
ITKMVSVGGRLWCGCQNRVLVLSPDTLQLEHMFYVGQDSSRCVACMVDSSLGVWVTLKGSAHVCLYHPDT
FEQLAEVDVTPPVHRMLAGSDAIIRQHKAACLRITALLVCEELLWVGTSAGVVLTMPTSPGTVSCPRAPL
SPTGLGQGHTGHVRFLAAVQLPDGFNLLCPTPPPPPDTGPEKLPSLEHRDSPWHRGPAPARPKMLVISGG
DGYEDFRLSSGGGSSSETVGRDDSTNHLLLWRV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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