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Report for CCDS10071.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10071.1 Public Homo sapiens 15 INO80 24 110 108 CCDS HistoryNCBI Gene:54617Re-query CCDS DB by CCDS ID:10071.1Re-query CCDS DB by GeneID:54617See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10071.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000648947.1 ENSP00000497609.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000648947.1Link to Ensembl Protein Viewer:ENSP00000497609.1Re-query CCDS DB by Nucleotide ID:ENST00000648947Re-query CCDS DB by Protein ID:ENSP00000497609
Original member Current member NCBI NM_017553.3 NP_060023.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017553.3Link to Protein Sequence:NP_060023.1Re-query CCDS DB by Nucleotide ID:NM_017553Re-query CCDS DB by Protein ID:NP_060023Link to BLAST:NP_060023.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060023.1 1556 Q9ULG1 1556 100% 0 0

Chromosomal Locations for CCDS 10071.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 40980223 40980440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40982862 40983077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40983762 40983921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40984197 40984352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40985338 40985426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40987091 40987193 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40987816 40987974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 40997529 40997601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41005593 41005687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41016088 41016215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41020900 41021125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41027596 41027736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41044904 41045075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41047408 41047501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41048212 41048276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41049287 41049420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41049935 41050102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41053929 41054014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41055247 41055364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41056622 41056706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41058639 41058781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41059867 41059926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41069570 41069665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41070467 41070547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41071849 41072058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41073428 41073495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41074370 41074565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41079701 41079904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41081020 41081073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41085369 41085583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41087562 41087682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41092027 41092182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41095601 41095668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41095759 41095928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 41096168 41096310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4671 nt):
ATGGCCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTTCAGT
AC
TTGGAGAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATATTTC
T
AGTGATGACAGTGAAGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATA
CAA
GTTAAGGAAGAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAA
AC
ACATATTCTCTGAATGGAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGAATTTATATAATTTCTC
T
AAGCTGAAGAAAAGCAGAAAGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCT
CAG
AGTGAAGACGATGATGAAGAAGAACTCAATCTCAGCAGAGAAGAACTTCACAACATGCTTCGACTAC
AC
AAATATAAGAAACTTCACCAAAATAAGTATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAG
T
GCAGGCCTGCTCTCCACATATGACCCTTTCTATGAGCAACAACGGCACCTACTTGGACCCAAGAAAAAG
AAA
TTTAAGGAGGAAAAGAAACTTAAAGCTAAGTTGAAAAAAGTGAAGAAAAAAAGACGAAGAGATGAAG
AA
CTTTCCTCTGAAGAATCCCCTCGTCGCCATCACCACCAGACCAAAGTCTTTGCCAAGTTTTCTCACGA
T
GCACCTCCCCCTGGCACTAAGAAAAAGCACTTATCCATTGAGCAGCTGAATGCTCGTCGCAGGAAAGTA
TGG
CTCAGCATTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGAAAGCTTCAGCTCGTAACCTGTTTC
TC
ACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTCGAGCTGCCTTGCAGGCCCAGAA
G
AACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTCTGTACTGGAAGAAATAT
GAG
AAAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTGGAGCAGCGGAAGTTGGATGAGG
AA
ATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTATGCCCA
T
TTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAGGAAACTGGAAGAC
AGT
TCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACAGGAGGATTATGATA
GT
AACCATTTTAAAGCCCAGGCCCTGAAGAATGCTGAAAATGCTTACCATATTCACCAAGCTCGGACAAG
G
TCATTTGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTGGG
TTT
GGGGAGAGTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACAATTT
TT
AATGGCAAATTGAAAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCAATCTATATGAACAGGGTAT
T
AATGGCATTCTTGCTGATGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCCATCTG
GCT
GAGAGAGAGAACATTTGGGGACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACC
AG
GAGTTTACTAGATTTGTTCCTAAATTTAAGGTGCTACCATATTGGGGAAATCCTCATGATAGAAAAGT
C
ATCAGAAGGTTCTGGAGTCAGAAGACCCTCTACACTCAGGATGCCCCCTTCCATGTGGTTATTACCAGC
TAT
CAGCTGGTGGTGCAGGATGTAAAGTATTTCCAGCGGGTCAAGTGGCAATACATGGTACTGGATGAGG
CT
CAGGCGCTCAAGAGTAGTTCCAGTGTTCGTTGGAAGATCCTCTTACAGTTCCAGTGTCGGAATCGGCT
T
TTGCTAACCGGGACCCCAATTCAGAACACCATGGCAGAGCTTTGGGCTCTGCTGCATTTCATTATGCCA
ACA
TTATTTGATTCACATGAGGAATTTAATGAATGGTTTTCCAAGGACATTGAGAGCCATGCCGAAAACA
AA
TCTGCTATTGATGAGAATCAACTTTCTCGCTTACACATGATTTTGAAGCCATTTATGCTGAGGAGAAT
C
AAGAAAGATGTGGAAAATGAATTATCTGACAAGATTGAGATTCTAATGTATTGCCAACTGACCAGCCGA
CAG
AAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGATTTATTGCAGTCTTCTATGGGCT
CT
ACCCAACAAGCACAGAACACCACCAGCAGCCTCATGAATCTGGTCATGCAGTTTAGGAAGGTGTGTAA
T
CACCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCCATTTCATATTTCCCTAAAGCCATACCACATT
TCA
AAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAATCATTCACGAGACAGGTGGTTAAGGGTTC
TT
TCTCCATTTGCACCAGACTATATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAATGAAGAAAGCTG
T
TTCTCTTTCCTTCGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTG
GCC
AGATGGTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTACGCTCCTGGGGAG
CG
CCAGAAGGGGAGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACT
C
TCCTTTCCAAACCTTTGCAGCTGCCCTTTGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTG
AGT
GGCTACTCAGACCAGGTTGTCCATCAGCGGAGATCAGCTACCTCCTCGCTGCGTCGCTGCCTGCTCA
CT
GAGCTGCCATCTTTTTTGTGTGTGGCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCTTACTGCAA
T
GACCGAAGTGCAGAATATGAAAGGCGAGTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTG
TTG
AATGGGGCCCCTGAACTGGCTGCAGACTGGCTAAATAGACGATCACAGTTCTTCCCAGAGCCAGCTG
GA
GGTCTGTGGAGCATCAGACCTCAGAATGGCTGGTCTTTCATCAGGATTCCAGGCAAGGAGAGCCTCAT
C
ACTGACAGTGGAAAGCTGTATGCCCTTGATGTCCTGCTGACTCGGCTCAAGTCTCAAGGGCATAGGGTC
CTT
ATCTACTCCCAGATGACCAGGATGATAGACCTACTGGAGGAATACATGGTTTACAGGAAGCATACCT
AC
ATGAGGCTTGATGGCTCATCCAAGATCTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAACAGGAA
T
GACATCTTTGTGTTCCTGTTAAGCACACGAGCTGGAGGACTGGGTATCAATCTCACTGCTGCAGACACA
GTG
ATTTTCTATGATAGCGACTGGAACCCCACTGTGGACCAGCAGGCCATGGACAGGGCCCACCGCTTAG
GG
CAGACAAAGCAGGTTACTGTGTACCGGCTCATCTGTAAAGGCACCATTGAAGAACGCATTCTGCAAAG
A
GCCAAGGAGAAGAGTGAGATTCAGCGGATGGTGATTTCAGGTGGGAACTTCAAACCAGATACCTTGAAA
CCC
AAAGAGGTGGTTAGTCTTCTTCTAGACGACGAAGAGTTGGAGAAGAAACTGAGGCTGCGGCAGGAAG
AG
AAACGGCAACAGGAGGAAACCAACCGAGTGAAAGAGCGCAAGCGGAAGCGGGAAAAGTATGCAGAGAA
G
AAGAAAAAAGAAGATGAATTGGATGGGAAAAGGAGAAAAGAGGGTGTGAACCTGGTGATCCCATTTGTT
CCC
TCGGCTGATAACTCCAACCTCTCTGCTGACGGAGATGACTCCTTCATTAGCGTGGACTCAGCCATGC
CA
AGCCCTTTCAGTGAGATCTCCATCAGCAGTGAGCTGCACACTGGCTCCATTCCCCTGGACGAGAGCAG
C
AGTGACATGCTGGTCATTGTGGATGACCCAGCCTCCTCAGCCCCTCAGTCTCGAGCTACCAACTCTCCC
GCA
TCCATAACAGGCTCCGTCTCAGATACCGTGAATGGAATTTCCATTCAGGAAATGCCAGCTGCAGGAC
GT
GGTCACTCAGCCCGAAGCCGAGGCCGCCCCAAAGGTTCAGGAAGCACAGCCAAAGGAGCAGGGAAGGG
C
CGGAGCCGAAAGTCCACGGCAGGCAGTGCTGCTGCAATGGCAGGAGCCAAAGCCGGGGCTGCAGCGGCC
TCT
GCAGCTGCCTATGCCGCATACGGGTACAACGTGTCTAAAGGAATCTCCGCCAGCAGTCCTCTGCAGA
CA
TCCCTTGTTCGGCCTGCTGGCCTTGCTGACTTTGGACCTTCAAGCGCCTCTTCTCCTTTGAGTTCCCC
T
TTGAGCAAGGGAAATAATGTTCCTGGGAATCCCAAGAACCTCCACATGACCAGCAGCCTAGCCCCAGAC
TCT
CTGGTCCGGAAACAGGGCAAAGGCACCAACCCCTCTGGAGGACGGTAA


Translation (1556 aa):
MASELGARDDGGCTELAKPLYLQYLERALRLDHFLRQTSAIFNRNISSDDSEDGLDDSNPLLPQSGDPLI
Q
VKEEPPNSLLGETSGAGSSGMLNTYSLNGVLQS
ESKCDKGNLYNFSKLKKSRKWLKSILLSDESSEADS
Q
SEDDDEEELNLSREELHNMLRLHKYKKLHQNKYSKDKE
LQQYQYYSAGLLSTYDPFYEQQRHLLGPKKK
K
FKEEKKLK
AKLKKVKKKRRRDEELSSEESPRRHHHQTKVFAKFSHDAPPPGTKKKHLSIEQLNARRRKV
W
LSIVKKELPK
ANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQKNCKETLPRARRLTKEMLLYWKKY
E
KVEKEHRKRAEKEALEQRKLDEEMRE
AKRQQRKLNFLITQTELYAHFMSRKRDMGHDGIQEEILRKLED
S
STQRQIDIGGGVVVNITQEDY
DSNHFKAQALKNAENAYHIHQARTRSFDEDAKESRAAALRAANKSGTG
F
GESYSLANPSIRAGEDIPQPTIFNGKLKGYQLKGMNWLANLYEQ
GINGILADEMGLGKTVQSIALLAHL
A
E
RENIWGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHVVITS
Y
QLVVQDVKYFQRVKWQYMVLDEAQALKSSS
SVRWKILLQFQCRNRLLLTGTPIQNTMAELWALLHFIMP
T
LFDSHEEFNEWFSKDIESHAENKSAIDE
NQLSRLHMILKPFMLRRIKKDVENELSDKIEILMYCQLTSR
Q
KLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLMNLVMQFRK
VCNHPELFERQETWSPFHISLKPYHI
S
KFIYRHGQIRVFNHSRD
RWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLL
A
RWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAV
S
GYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPR
VTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCL
L
NGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIP
GKESLITDSGKLYALDVLLTRLKSQGHRV
L
IYSQMTRMIDLLE
EYMVYRKHTYMRLDGSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADT
V
IFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICKGTIEERILQRAKEKSE
IQRMVISGGNFKPDTLK
P
KEVVSLLLDDEELEKK
LRLRQEEKRQQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFV
P
SADNSNLSADGDDSFISVDSAMPSPFSE
ISISSELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSP
A
SITGSVSDTVN
GISIQEMPAAGRGHSARSRGRPKGSGSTAKGAGKGRSRKSTAGSAAAMAGAKAGAAAA
S
AAAYAAYGYNVSK
GISASSPLQTSLVRPAGLADFGPSSASSPLSSPLSKGNNVPGNPKNLHMTSSLAPD
S
LVRKQGKGTNPSGGR




Links Key
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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