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Report for CCDS14379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14379.1 Public Homo sapiens X MTMR8 24 110 108 CCDS HistoryNCBI Gene:55613Re-query CCDS DB by CCDS ID:14379.1Re-query CCDS DB by GeneID:55613See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14379.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374852.4 ENSP00000363985.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374852.4Link to Ensembl Protein Viewer:ENSP00000363985.3Re-query CCDS DB by Nucleotide ID:ENST00000374852Re-query CCDS DB by Protein ID:ENSP00000363985
Original member Current member NCBI NM_017677.4 NP_060147.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017677.4Link to Protein Sequence:NP_060147.2Re-query CCDS DB by Nucleotide ID:NM_017677Re-query CCDS DB by Protein ID:NP_060147Link to BLAST:NP_060147.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060147.2 704 Q96EF0-1 704 100% 0 0

Chromosomal Locations for CCDS 14379.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 64268537 64269043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64270947 64271073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64328772 64328900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64331557 64331757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64336079 64336128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64337268 64337393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64343611 64343720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64345045 64345177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64348660 64348794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64349942 64350070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64354777 64354934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64356176 64356338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64359405 64359527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 64395340 64395363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2115 nt):
ATGGATCATATTACGGTACCCAAGGTAGAAAACGTGAAATTGGTGGATCGTTATGTGAGTAAGAAACCAG
CTAATGGGATTCTTTATCTTACTGCAACCCACCTGATCTATGTGGAGGCTTCAGGTGCAGCCCGGAAAGA
AACATGGATTGCACTCCATCACATTGCCACTGTGGAGAAGTTACCCATCACTAGCCTGGGTTGTCCCCTG
ACCCTCCGCTGCAAGAATTTCCGGGTGGCCCACTTTGTTTTAGATTCTGACCTTGTGTGCCATGAGGTTT
ATATTTCACTGCTCAAGCTTTCTCAGCCAGCATTACCTGAAGATCTTTATGCTTTTTCTTATAATCCCAA
ATCCTCAAAAGAGATGAGGGAAAGTGGATGGAAACTGATTGACCCAATATCAGACTTTGGGCGTATGGGA
ATACCCAACAGAAACTGGACCATAACAGATGCCAACAGAAACTATGAGATATGCAGCACCTACCCTCCTG
AAATAGTGGTTCCTAAATCTGTTACCTTGGGAACGGTGGTTGGAAGTTCAAAGTTCAGAAGTAAAGAACG
TGTCCCTGTGCTCTCCTACCTCTACAAAGAGAACAATGCTGCCATTTGCCGCTGTAGCCAGCCTCTCTCT
GGATTTTACACTCGCTGTGTAGATGATGAGCTCTTGTTGGAGGCCATTAGCCAAACAAACCCAGGGAGCC
AGTTTATGTATGTTGTAGACACAAGACCAAAGTTGAATGCCATGGCCAACCGAGCAGCTGGGAAGGGGTA
TGAAAATGAAGACAACTATGCCAACATTCGCTTCAGATTCATGGGCATTGAGAACATCCATGTAATGCGG
AGCAGTCTGCAGAAACTCTTGGAAGTTTGTGAATTGAAAACTCCAACAATGAGTGAATTTCTTAGCGGCC
TGGAGAGCTCAGGGTGGTTAAGACACATTAAAGCTATTATGGATGCTGGAATTTTCATTACAAAGGCAGT
GAAGGTAGAAAAGGCCAGTGTCTTAGTCCATTGTTCTGATGGATGGGACCGCACAGCACAAGTCTGCTCA
GTGGCTAGCATCCTCCTAGATCCATTTTATAGGACATTCAAAGGACTCATGATCTTGATAGAGAAGGAAT
GGATATCCATGGGCCACAAGTTTTCCCAAAGGTGTGGCCACCTCGATGGGGACTCTAAAGAAGTGTCCCC
TATCTTCACCCAGTTCCTAGACTGTATCTGGCAATTAATGGAACAGTTTCCCTGTGCCTTTGAGTTTAAT
GAAAACTTCCTGCTGGAGATTCATGACCATGTTTTCTCCTGCCAGTTTGGAAACTTCCTTGGTAACTGCC
AGAAGGATCGGGAAGATCTAAGAGTCTATGAGAAAACACATTCTGTGTGGCCTTTCTTGGTTCAGAGGAA
ACCAGACTTCAGGAACCCTCTCTATAAAGGCTTCACTATGTATGGGGTACTCAATCCTAGTACTGTGCCC
TACAACATTCAGTTCTGGTGTGGGATGTATAACCGCTTTGACAAAGGGCTGCAGCCCAAGCAGAGTATGC
TAGAGAGCCTCCTGGAAATTAAGAAACAGAGAGCAATGCTGGAGACAGATGTGCATGAACTAGAAAAGAA
ACTAAAAGTCCGTGATGAGCCACCAGAAGAGATCTGTACCTGCTCTCAATTAGGAAACATATTATCCCAG
CATCTGGGAAGTCCTTTGACCAATCCTCTTGGCTTTATGGGTATCAATGGAGACCTGAATACCCTGATGG
AGAATGGCACCCTATCCAGGGAAGGAGGCCTCCGAGCTCAGATGGATCAAGTAAAAAGCCAGGGTGCAGA
CCTCCACCATAACTGTTGTGAGATTGTGGGCAGCCTTAGGGCCATAAATATCTCTGGGGATGTGGGCATC
TCTGAGGCCATGGGCATCTCTGGAGACATGTGCACCTTTGAGGCTACGGGCTTCTCCAAAGACTTAGGAA
TCTGTGGGGCCATGGACATCTCTGAGGCCACTGGCATCTCTGGAAACTTGGGTATTTCTGAGGCCAGGGG
TTTCTCTGGGGACATGGGCATCTTGGGGGACACAGGCATCTCCAAGGCCAGCACCAAGGAGGCAGACTAC
TCCAAGCATCAGTGA

Translation (704 aa):
MDHITVPKVENVKLVDRYVSKKPANGILYLTATHLIYVEASGAARKETWIALHHIATVEKLPITSLGCPL
TLRCKNFRVAHFVLDSDLVCHEVYISLLKLSQPALPEDLYAFSYNPKSSKEMRESGWKLIDPISDFGRMG
IPNRNWTITDANRNYEICSTYPPEIVVPKSVTLGTVVGSSKFRSKERVPVLSYLYKENNAAICRCSQPLS
GFYTRCVDDELLLEAISQTNPGSQFMYVVDTRPKLNAMANRAAGKGYENEDNYANIRFRFMGIENIHVMR
SSLQKLLEVCELKTPTMSEFLSGLESSGWLRHIKAIMDAGIFITKAVKVEKASVLVHCSDGWDRTAQVCS
VASILLDPFYRTFKGLMILIEKEWISMGHKFSQRCGHLDGDSKEVSPIFTQFLDCIWQLMEQFPCAFEFN
ENFLLEIHDHVFSCQFGNFLGNCQKDREDLRVYEKTHSVWPFLVQRKPDFRNPLYKGFTMYGVLNPSTVP
YNIQFWCGMYNRFDKGLQPKQSMLESLLEIKKQRAMLETDVHELEKKLKVRDEPPEEICTCSQLGNILSQ
HLGSPLTNPLGFMGINGDLNTLMENGTLSREGGLRAQMDQVKSQGADLHHNCCEIVGSLRAINISGDVGI
SEAMGISGDMCTFEATGFSKDLGICGAMDISEATGISGNLGISEARGFSGDMGILGDTGISKASTKEADY
SKHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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