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Report for CCDS11180.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11180.1 Public Homo sapiens 17 ZNF624 24 110 108 CCDS HistoryNCBI Gene:57547Re-query CCDS DB by CCDS ID:11180.1Re-query CCDS DB by GeneID:57547See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11180.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000311331.12 ENSP00000310472.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000311331.12Link to Ensembl Protein Viewer:ENSP00000310472.7Re-query CCDS DB by Nucleotide ID:ENST00000311331Re-query CCDS DB by Protein ID:ENSP00000310472
Original member Current member NCBI NM_020787.4 NP_065838.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020787.4Link to Protein Sequence:NP_065838.2Re-query CCDS DB by Nucleotide ID:NM_020787Re-query CCDS DB by Protein ID:NP_065838Link to BLAST:NP_065838.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065838.2 865 Q9P2J8-1 865 100% 0 0

Chromosomal Locations for CCDS 11180.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 16622288 16624509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 16633862 16633957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 16634630 16634756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 16647329 16647394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 16649658 16649744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2598 nt):
ATGTCTTTGCAAGACTCCACTCTTTCCAGAGAGGGGAAACCAGAGGGAGAGATTATGGCTGCTGTGTTTT
TCTCAGTTGGACGCCTGAGCCCTGAAGTTACCCAGCCAGATGAAGATCTTCACCTTCAGGCAGAAGAAAC
ACAATTGGTAAAGGAATCGGTGACATTTAAGGATGTGGCTATAGACTTCACATTGGAGGAGTGGAGGTTG
ATGGACCCTACACAGAGGAACCTGCACAAGGATGTGATGCTAGAGAATTACAGGAATCTGGTCTCCCTGG
GGCTTGCAGTTTCCAAACCAGACATGATATCTCATTTGGAGAATGGGAAAGGACCATGGGTGACGGTGAG
AGAAATTTCAAGAATTCCCTATCCTGACATGGAGCCCAAACCTGCAACCAAGAAGGCTACACGAACAAAG
GCTATTTCTGAAGATTTATCACAGGAGGCCATACTAGAGAAACTTACAGAGAATGGTCTGTGGGATTCCA
GAATGGAAGGGTTATGGAAATGGAATGATAGGATATTGAGATTACAAAATAATCAGGAGAATCATTTGAG
TCAAAGAATAATTCCACTCAAGAAGACTCCCACTAGTCAAAGAGGCTTTAGATTTGAATCTATTCTTATT
CCAGAACCAGGCATTGCCACAGAAGAGCTTCACAGCAGATGCCAAACACAAGAGGAAAATTTCACAGAGA
ATTTAAATTTGATTACAGATACCCATTTGGGGAAGATAATTTGCAAGGAGATGAAAGGCAGCAAAGCCAT
AAGGCAGACTTCAGAACTAACTTTGGGGAAAAAATCCAATAATAAGGAAAAACCCTACAAATGTAGTACA
TGCGAAAAGGCCTTTCATTATAGATCATTGCTCATTCAACATCAAAGAACTCATACTAAAGAAAAACCTT
ATGAATGTAATGAATGTGGGAAAACATTCAGCCAGCCTTCATATCTCAGTCAGCACAAAAAAATCCACAC
TGGAGAAAAACCCTATAAATGTAATGAATGTGGAAAGGCCTTCATTGCTTCTTCATCACTTATGGTACAT
CAGAGAATTCACACTAAAGAGAAACCTTATCAGTGTAATGTGTGTGGGAAATCTTTTAGCCAGTGTGCCC
GTCTTAATCAGCACCAGAGAATTCAAACTGGAGAGAAACCCTATAAATGTAGTGAATGCGGGAAAGCTTT
TAGTGATAAATCAAAACTTGCAAGACATCAGGAAACTCACAATGGTGAGAAACCCTACAAATGTGATGAT
TGTGGGAAAGCCTTTAGGAACAAGTCATATCTTAGTGTACATCAGAAGACCCACACTGAAGAGAAACCAT
ATCAGTGCAACGAGTGTGGGAAGTCTTTTAAGAATACCACAATTTTTAATGTGCATCAGAGGATTCATAC
TGGAGAGAAACCTTTTAGATGTAACGAATGTGGAAAAGCCTATAGAAGTAATTCAAGCCTTATCGTACAT
ATAAGAACTCACACTGGGGAAAAACCCTATGAATGTAATGAATGTGGGAAAGCATTCAACCGCATCGCAA
ATTTCACAGAACATCAGCGAATTCACACAGGAGAAAAACCCTATAAATGTAATGAATGTGGGAAAGCATT
CATTAATTATTCATGCCTTACTGTACACCACAGAATGCATACAGGAGAGAAACCTTATAAATGTACTGAA
TGTGGAAAGGCCTTCATGCGTTCTTCTTCTCTAATTATACATCAGCGTATTCATACTGAAGAGAAACCTT
ATCTGTGCAATGAATGTGGGGAGTCTTTCAGAATAAAATCACACTTAACTGTACATCAGAGAATTCACAC
TGGAGAGAAACCATATAAATGTACTGACTGCGAGAGGGCATTCACCAAAATGGTAAATCTCAAGGAGCAT
CAGAAAATTCATACTGGAGTGAAACCCTATAAATGTTATGACTGTGGAAAGTCCTTTAGGACTAAATCAT
ACCTTATTGTACATCAGAGGACCCATACTGGAGAAAAACCATATAAATGTAATGAATGTGAGAAAGCCTT
CACTAATACATCACAGCTTACCGTGCACCAACGAAGGCATACTGGAGAGAAGCCCTATAAATGCAATGAA
TGTGGAAAGGTTTTCACAAGTAACTCAGGCTTTAATACACATCAAAGAACACATACTGGAGAGAAACCAT
TTAAATGTAATGACTGTGGGAAAGCATTTAGCCAGATGGTACATGTCACAGAACATCAGAAAATCCATAG
TGGAGAGAAGCCCTATAAGTGTGATGTCTGTGGAAAAGCCTTCAGGAGGGGTTCTTACCTTACAGTGCAT
TGGAGAACACACACTGGAGAAAAACCCTACACCTGTAAGGAATGTGGAAAGGGTTGTATTACTCTATCAC
AGCTAACCCTACATCAGAGAATTCATACTGGGGAGAGGCCCTATAAATGTGAAGAATGTGGAAAAGCCTT
CAGAACTAACTCAGACTTTACTGTACACTTGAGGATGCATACTGGAGAAAAACCCTATAAATGTAATGAA
TGTGGAAAAGCCTTCAGGAGTAGTTCGAGCCTTACTGTACATCAAAGAATACATCAAAGAGAAACTCAGT
TAATATAA

Translation (865 aa):
MSLQDSTLSREGKPEGEIMAAVFFSVGRLSPEVTQPDEDLHLQAEETQLVKESVTFKDVAIDFTLEEWRL
MDPTQRNLHKDVMLENYRNLVSLGLAVSKPDMISHLENGKGPWVTVREISRIPYPDMEPKPATKKATRTK
AISEDLSQEAILEKLTENGLWDSRMEGLWKWNDRILRLQNNQENHLSQRIIPLKKTPTSQRGFRFESILI
PEPGIATEELHSRCQTQEENFTENLNLITDTHLGKIICKEMKGSKAIRQTSELTLGKKSNNKEKPYKCST
CEKAFHYRSLLIQHQRTHTKEKPYECNECGKTFSQPSYLSQHKKIHTGEKPYKCNECGKAFIASSSLMVH
QRIHTKEKPYQCNVCGKSFSQCARLNQHQRIQTGEKPYKCSECGKAFSDKSKLARHQETHNGEKPYKCDD
CGKAFRNKSYLSVHQKTHTEEKPYQCNECGKSFKNTTIFNVHQRIHTGEKPFRCNECGKAYRSNSSLIVH
IRTHTGEKPYECNECGKAFNRIANFTEHQRIHTGEKPYKCNECGKAFINYSCLTVHHRMHTGEKPYKCTE
CGKAFMRSSSLIIHQRIHTEEKPYLCNECGESFRIKSHLTVHQRIHTGEKPYKCTDCERAFTKMVNLKEH
QKIHTGVKPYKCYDCGKSFRTKSYLIVHQRTHTGEKPYKCNECEKAFTNTSQLTVHQRRHTGEKPYKCNE
CGKVFTSNSGFNTHQRTHTGEKPFKCNDCGKAFSQMVHVTEHQKIHSGEKPYKCDVCGKAFRRGSYLTVH
WRTHTGEKPYTCKECGKGCITLSQLTLHQRIHTGERPYKCEECGKAFRTNSDFTVHLRMHTGEKPYKCNE
CGKAFRSSSSLTVHQRIHQRETQLI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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