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Report for CCDS10701.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10701.1 Public Homo sapiens 16 ZNF668 24 110 108 CCDS HistoryNCBI Gene:79759Re-query CCDS DB by CCDS ID:10701.1Re-query CCDS DB by GeneID:79759See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10701.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300849.5 ENSP00000300849.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300849.5Link to Ensembl Protein Viewer:ENSP00000300849.4Re-query CCDS DB by Nucleotide ID:ENST00000300849Re-query CCDS DB by Protein ID:ENSP00000300849
Original member Current member EBI ENST00000394983.6 ENSP00000378434.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000394983.6Link to Ensembl Protein Viewer:ENSP00000378434.2Re-query CCDS DB by Nucleotide ID:ENST00000394983Re-query CCDS DB by Protein ID:ENSP00000378434
Original member Current member EBI ENST00000538906.5 ENSP00000440149.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538906.5Link to Ensembl Protein Viewer:ENSP00000440149.1Re-query CCDS DB by Nucleotide ID:ENST00000538906Re-query CCDS DB by Protein ID:ENSP00000440149
Original member Current member EBI ENST00000535577.5 ENSP00000441349.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535577.5Link to Ensembl Protein Viewer:ENSP00000441349.1Re-query CCDS DB by Nucleotide ID:ENST00000535577Re-query CCDS DB by Protein ID:ENSP00000441349
Original member Current member NCBI NM_001172668.2 NP_001166139.1 Accepted alive Link to Nucleotide Sequence:NM_001172668.2Link to Protein Sequence:NP_001166139.1Re-query CCDS DB by Nucleotide ID:NM_001172668Re-query CCDS DB by Protein ID:NP_001166139Link to BLAST:NP_001166139.1
Original member Current member NCBI NM_001172670.2 NP_001166141.1 Accepted alive Link to Nucleotide Sequence:NM_001172670.2Link to Protein Sequence:NP_001166141.1Re-query CCDS DB by Nucleotide ID:NM_001172670Re-query CCDS DB by Protein ID:NP_001166141Link to BLAST:NP_001166141.1
Original member Current member NCBI NM_024706.5 NP_078982.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024706.5Link to Protein Sequence:NP_078982.3Re-query CCDS DB by Nucleotide ID:NM_024706Re-query CCDS DB by Protein ID:NP_078982Link to BLAST:NP_078982.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001166139.1 619 Q96K58-1 619 100% 0 0
NP_001166141.1 619 Q96K58-1 619 100% 0 0
NP_078982.3 619 Q96K58-1 619 100% 0 0

Chromosomal Locations for CCDS 10701.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 31061068 31062280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 31063813 31064459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1860 nt):
ATGGAAGTGGAGGCTGCAGAGGCCCGGTCCCCAGCCCCCGGCTACAAGCGCTCGGGCCGCCGCTACAAGT
GCCTGTCCTGTACCAAGACATTTCCAAACGCGCCCAGGGCAGCGCGCCACGCTGCCACACATGGGCCGGC
AGACTGCTCTGAAGAGGTGGCCGAGGTGAAGCCAAAGCCAGAGACAGAAGCTAAGGCAGAGGAAGCCAGT
GGGGAGAAGGTGTCAGGCTCCGCGGCCAAGCCTAGGCCCTATGCGTGTCCGCTATGCCCCAAGGCCTACA
AGACGGCACCCGAGCTGCGCAGCCACGGGCGCAGCCACACGGGGGAGAAGCCCTTTCCGTGCCCCGAGTG
CGGCCGCCGCTTCATGCAGCCCGTGTGCCTGCGCGTGCACCTGGCCTCGCACGCTGGCGAACTGCCCTTC
CGCTGTGCGCACTGCCCGAAGGCCTATGGCGCGCTCTCCAAGCTCAAGATCCACCAGCGTGGCCACACAG
GCGAGCGGCCTTACGCCTGCGCCGACTGCGGCAAGAGCTTTGCTGACCCTTCAGTGTTCCGCAAGCACCG
GCGTACTCACGCTGGCCTGCGGCCCTACAGCTGTGAGCGTTGCGGCAAAGCCTATGCGGAGCTCAAGGAC
CTCCGCAACCATGAGCGGTCCCACACCGGCGAGCGCCCCTTCCTCTGCTCCGAGTGCGGGAAGAGCTTCT
CCCGCTCATCCTCGCTCACGTGCCACCAGCGCATCCACGCGGCACAGAAGCCCTACCGCTGCCCGGCCTG
CGGCAAGGGCTTCACGCAGCTCAGTTCCTACCAGAGCCACGAGCGCACGCACTCGGGGGAGAAGCCCTTC
CTGTGCCCGCGCTGCGGCCGCATGTTCTCCGACCCCTCGAGCTTCCGTCGCCACCAGCGCGCCCATGAAG
GGGTGAAGCCATACCACTGCGAGAAGTGCGGCAAGGACTTCCGGCAGCCGGCGGACCTGGCCATGCACCG
GCGTGTGCACACAGGCGACCGGCCGTTCAAGTGCCTGCAATGTGACAAGACGTTCGTGGCGTCCTGGGAC
CTCAAGCGGCACGCGCTGGTGCACTCTGGCCAGCGGCCCTTCCGCTGTGAGGAGTGCGGGCGAGCCTTCG
CCGAGCGTGCCAGCCTCACGAAGCATAGCCGGGTGCACTCGGGGGAGCGCCCCTTCCACTGTAACGCATG
TGGGAAATCCTTTGTGGTGTCGTCGAGCCTGAGGAAGCACGAGCGGACCCATCGAAGCAGTGAGGCCGCG
GGTGTGCCCCCTGCACAGGAGCTGGTGGTGGGGTTGGCGCTGCCTGTGGGCGTGGCAGGTGAGAGTTCAG
CCGCCCCGGCAGCAGGGGCGGGGCTGGGGGACCCTCCAGCAGGGCTGCTAGGGCTGCCCCCGGAGTCAGG
TGGTGTGATGGCCACACAGTGGCAGGTGGTGGGCATGACGGTGGAGCATGTGGAATGCCAAGATGCTGGT
GTCCGGGAGGCTCCTGGTCCCTTGGAAGGGGCAGGCGAGGCGGGGGGTGAGGAGGCTGACGAGAAGCCCC
CCCAGTTTGTGTGCCGAGAGTGCAAGGAGACCTTCTCCACAATGACGCTGCTGCGTCGGCACGAGCGCTC
ACACCCGGAGCTCCGGCCCTTCCCCTGCACCCAGTGCGGCAAGAGCTTCTCTGACCGGGCTGGGCTGCGC
AAACACAGCCGCACTCACAGCTCAGTGCGCCCCTACACCTGCCCCCATTGTCCCAAGGCCTTCTTGAGTG
CCAGCGACTTGCGCAAGCATGAACGCACCCACCCTGTGCCCATGGGGACCCCCACACCCCTGGAGCCCCT
GGTGGCTTTGCTAGGAATGCCTGAAGAGGGGCCGGCCTGA

Translation (619 aa):
MEVEAAEARSPAPGYKRSGRRYKCLSCTKTFPNAPRAARHAATHGPADCSEEVAEVKPKPETEAKAEEAS
GEKVSGSAAKPRPYACPLCPKAYKTAPELRSHGRSHTGEKPFPCPECGRRFMQPVCLRVHLASHAGELPF
RCAHCPKAYGALSKLKIHQRGHTGERPYACADCGKSFADPSVFRKHRRTHAGLRPYSCERCGKAYAELKD
LRNHERSHTGERPFLCSECGKSFSRSSSLTCHQRIHAAQKPYRCPACGKGFTQLSSYQSHERTHSGEKPF
LCPRCGRMFSDPSSFRRHQRAHEGVKPYHCEKCGKDFRQPADLAMHRRVHTGDRPFKCLQCDKTFVASWD
LKRHALVHSGQRPFRCEECGRAFAERASLTKHSRVHSGERPFHCNACGKSFVVSSSLRKHERTHRSSEAA
GVPPAQELVVGLALPVGVAGESSAAPAAGAGLGDPPAGLLGLPPESGGVMATQWQVVGMTVEHVECQDAG
VREAPGPLEGAGEAGGEEADEKPPQFVCRECKETFSTMTLLRRHERSHPELRPFPCTQCGKSFSDRAGLR
KHSRTHSSVRPYTCPHCPKAFLSASDLRKHERTHPVPMGTPTPLEPLVALLGMPEEGPA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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