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Report for CCDS9933.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9933.1 Public Homo sapiens 14 CLMN 24 110 108 CCDS HistoryNCBI Gene:79789Re-query CCDS DB by CCDS ID:9933.1Re-query CCDS DB by GeneID:79789See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9933.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298912.9 ENSP00000298912.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298912.9Link to Ensembl Protein Viewer:ENSP00000298912.3Re-query CCDS DB by Nucleotide ID:ENST00000298912Re-query CCDS DB by Protein ID:ENSP00000298912
Original member Current member NCBI NM_024734.4 NP_079010.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024734.4Link to Protein Sequence:NP_079010.2Re-query CCDS DB by Nucleotide ID:NM_024734Re-query CCDS DB by Protein ID:NP_079010Link to BLAST:NP_079010.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079010.2 1002 Q96JQ2 1002 100% 0 0

Chromosomal Locations for CCDS 9933.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 95191564 95191732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95193849 95193919 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95194536 95194596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95196498 95196694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95202838 95204463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95209395 95209477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95210686 95210879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95213219 95213409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95215641 95215733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95221691 95221774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95223760 95223855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95230072 95230133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 95319711 95319792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3009 nt):
ATGGCTGCACACGAGTGGGACTGGTTCCAACGCGAGGAGCTCATCGGGCAGATTAGCGACATCCGAGTGC
AGAACCTGCAAGTTGAGAGGGAAAATGTGCAGAAGAGGACCTTTACACGATGGATAAATCTACATCTAGA
AAAGTGCAACCCACCTCTAGAAGTTAAAGATTTATTCGTCGATATACAAGATGGCAAAATCCTAATGGCT
TTGTTAGAAGTCCTGTCTGGGCGGAATCTGCTGCACGAATACAAATCCTCGTCGCATCGTATTTTTCGGT
TGAACAACATAGCGAAAGCACTTAAGTTTTTGGAAGATAGCAATGTAAAACTGGTTAGCATTGATGCAGC
AGAAATAGCAGATGGCAACCCTTCTTTGGTTCTTGGGCTGATATGGAACATAATCCTCTTCTTCCAGATT
AAGGAGCTCACAGGCAACCTCAGCAGAAACTCTCCATCTTCCAGCTTGTCCCCTGGCTCAGGGGGCACAG
ACTCAGACTCATCCTTCCCACCCACACCCACTGCAGAGAGGAGCGTGGCAATATCGGTGAAAGACCAGAG
GAAGGCTATCAAGGCCCTGTTGGCGTGGGTGCAGAGGAAAACGAGAAAGTATGGCGTGGCGGTGCAGGAC
TTTGCGGGCAGTTGGAGGAGTGGGCTGGCTTTCCTGGCGGTGATCAAGGCCATTGACCCCAGCCTGGTGG
ACATGAAACAGGCCCTGGAAAATTCCACACGAGAAAATCTAGAGAAGGCTTTCAGCATCGCACAGGATGC
CCTGCACATCCCCAGGCTCCTGGAGCCAGAAGACATCATGGTTGACACACCAGACGAGCAGTCTATCATG
ACTTACGTGGCACAGTTTCTAGAACGTTTTCCGGAGTTGGAAGCCGAAGATATTTTCGATTCAGATAAAG
AAGTTCCTATCGAATCCACTTTTGTTCGCATCAAAGAAACTCCTTCTGAACAGGAGAGCAAAGTCTTCGT
TCTGACTGAAAATGGGGAGCGTACCTACACTGTTAACCATGAAACCAGCCACCCACCACCCTCCAAAGTC
TTTGTCTGTGACAAGCCCGAGAGCATGAAGGAATTCCGCCTGGATGGTGTTTCCAGCCATGCGCTGTCAG
ACAGCTCCACCGAGTTCATGCACCAGATTATTGACCAGGTCCTGCAAGGGGGCCCAGGTAAGACCAGCGA
CATCAGTGAGCCATCTCCAGAATCCTCCATTTTATCATCCAGAAAGGAGAACGGGAGGTCCAACTCTTTG
CCGATCAAGAAAACAGTTCACTTTGAGGCTGACACCTACAAGGATCCTTTCTGCAGTAAGAACCTGTCCC
TTTGCTTTGAAGGGAGCCCAAGAGTGGCAAAGGAATCATTGAGGCAGGATGGACATGTCTTGGCAGTTGA
GGTTGCTGAGGAAAAGGAACAGAAACAGGAATCCTCGAAGATTCCAGAATCCTCCTCTGACAAGGTCGCT
GGTGACATTTTTTTGGTGGAGGGCACAAACAATAATTCTCAGTCTTCTTCCTGTAATGGTGCTTTAGAGA
GTACAGCCCGCCACGATGAAGAAAGTCACTCTCTTTCACCCCCAGGAGAAAATACTGTGATGGCCGATTC
CTTCCAGATCAAGGTTAACCTGATGACTGTAGAAGCTTTAGAGGAGGGAGACTATTTTGAAGCCATCCCA
TTAAAAGCCTCAAAATTTAACAGCGACCTAATAGATTTTGCTTCTACCAGCCAGGCTTTCAACAAAGTTC
CTTCACCTCATGAGACAAAACCTGACGAGGATGCTGAGGCTTTTGAGAATCATGCTGAAAAACTAGGTAA
AAGGAGTATTAAATCTGCTCACAAAAAGAAGGATTCGCCAGAGCCTCAAGTTAAGATGGACAAACATGAA
CCTCATCAGGACTCCGGAGAAGAAGCTGAAGGCTGTCCTTCAGCCCCAGAAGAGACACCAGTGGATAAAA
AGCCAGAGGTGCATGAAAAGGCCAAGAGAAAGTCCACCCGTCCTCATTATGAGGAAGAGGGAGAAGACGA
TGACCTCCAGGGTGTGGGCGAGGAATTATCTTCCAGCCCCCCAAGCAGCTGTGTCAGCTTGGAGACCCTT
GGGAGTCACAGCGAAGAAGGCCTGGATTTCAAGCCCTCCCCACCCCTCTCAAAGGTTTCCGTCATTCCCC
ACGACCTCTTCTATTTCCCACACTATGAGGTTCCCCTGGCTGCAGTTTTGGAGGCTTATGTAGAAGACCC
GGAGGATCTAAAAAATGAAGAAATGGATCTCGAAGAGCCAGAGGGCTATATGCCAGACCTGGACTCCAGG
GAGGAGGAGGCCGATGGCTCTCAGAGCAGCTCCAGTTCCTCGGTGCCAGGAGAGAGCCTCCCCAGTGCCA
GCGACCAGGTGCTGTATCTCAGCAGGGGTGGTGTGGGTACCACACCAGCCTCAGAACCCGCTCCACTGGC
CCCCCATGAGGACCACCAGCAAAGGGAGACCAAAGAGAATGACCCCATGGACAGCCATCAGTCCCAGGAA
TCCCCAAACCTGGAAAACATAGCAAACCCCCTAGAAGAAAATGTAACGAAAGAATCAATCAGTAGTAAAA
AAAAGGAAAAAAGGAAACATGTGGACCACGTAGAAAGTTCACTATTTGTAGCACCAGGAAGTGTTCAATC
CTCAGATGACCTAGAAGAAGACAGTAGCGACTACAGCATTCCTTCCAGGACTAGTCACAGTGACTCCAGC
ATTTACCTTCGACGACATACTCATAGGTCTTCGGAATCGGATCATTTTAGCTATGTTCAGTTGAGGAACG
CAGCAGATCTGGATGACAGAAGAAACCGAATATTAACCAGGAAGGCCAACAGCTCAGGAGAAGCCATGTC
ACTGGGGAGCCACAGCCCGCAGAGTGACTCCCTGACACAGCTTGTCCAGCAGCCGGATATGATGTATTTT
ATTCTCTTCCTGTGGCTCCTGGTGTACTGCTTGCTGCTCTTCCCACAACTGGATGTTAGCAGGCTCTGA

Translation (1002 aa):
MAAHEWDWFQREELIGQISDIRVQNLQVERENVQKRTFTRWINLHLEKCNPPLEVKDLFVDIQDGKILMA
LLEVLSGRNLLHEYKSSSHRIFRLNNIAKALKFLEDSNVKLVSIDAAEIADGNPSLVLGLIWNIILFFQI
KELTGNLSRNSPSSSLSPGSGGTDSDSSFPPTPTAERSVAISVKDQRKAIKALLAWVQRKTRKYGVAVQD
FAGSWRSGLAFLAVIKAIDPSLVDMKQALENSTRENLEKAFSIAQDALHIPRLLEPEDIMVDTPDEQSIM
TYVAQFLERFPELEAEDIFDSDKEVPIESTFVRIKETPSEQESKVFVLTENGERTYTVNHETSHPPPSKV
FVCDKPESMKEFRLDGVSSHALSDSSTEFMHQIIDQVLQGGPGKTSDISEPSPESSILSSRKENGRSNSL
PIKKTVHFEADTYKDPFCSKNLSLCFEGSPRVAKESLRQDGHVLAVEVAEEKEQKQESSKIPESSSDKVA
GDIFLVEGTNNNSQSSSCNGALESTARHDEESHSLSPPGENTVMADSFQIKVNLMTVEALEEGDYFEAIP
LKASKFNSDLIDFASTSQAFNKVPSPHETKPDEDAEAFENHAEKLGKRSIKSAHKKKDSPEPQVKMDKHE
PHQDSGEEAEGCPSAPEETPVDKKPEVHEKAKRKSTRPHYEEEGEDDDLQGVGEELSSSPPSSCVSLETL
GSHSEEGLDFKPSPPLSKVSVIPHDLFYFPHYEVPLAAVLEAYVEDPEDLKNEEMDLEEPEGYMPDLDSR
EEEADGSQSSSSSSVPGESLPSASDQVLYLSRGGVGTTPASEPAPLAPHEDHQQRETKENDPMDSHQSQE
SPNLENIANPLEENVTKESISSKKKEKRKHVDHVESSLFVAPGSVQSSDDLEEDSSDYSIPSRTSHSDSS
IYLRRHTHRSSESDHFSYVQLRNAADLDDRRNRILTRKANSSGEAMSLGSHSPQSDSLTQLVQQPDMMYF
ILFLWLLVYCLLLFPQLDVSRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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