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Report for CCDS6942.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6942.1 Public Homo sapiens 9 PLPP7 24 110 108 CCDS HistoryNCBI Gene:84814Re-query CCDS DB by CCDS ID:6942.1Re-query CCDS DB by GeneID:84814See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6942.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372264.4 ENSP00000361338.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372264.4Link to Ensembl Protein Viewer:ENSP00000361338.3Re-query CCDS DB by Nucleotide ID:ENST00000372264Re-query CCDS DB by Protein ID:ENSP00000361338
Original member Current member NCBI NM_032728.4 NP_116117.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032728.4Link to Protein Sequence:NP_116117.3Re-query CCDS DB by Nucleotide ID:NM_032728Re-query CCDS DB by Protein ID:NP_116117Link to BLAST:NP_116117.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116117.3 271 Q8NBV4 271 100% 0 0

Chromosomal Locations for CCDS 6942.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 131289998 131290448 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 131307923 131308287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGCCAGCTTCCCAGAGCCGGGCCCGTGCCCGGGACCGCAACAACGTCCTCAACCGGGCTGAGTTCCTGT
CCCTGAACCAGCCCCCCAAGGGGGGCCCGGAGCCCCGCAGCTCGGGCAGAAAGGCCTCGGGCCCATCAGC
ACAGCCCCCACCTGCTGGTGACGGGGCCAGAGAGCGACGCCAGTCACAGCAGCTGCCAGAGGAGGACTGC
ATGCAGCTGAACCCCTCCTTCAAGGGCATCGCCTTCAACTCCCTGCTGGCCATCGATATCTGTATGTCCA
AGCGGCTGGGGGTGTGCGCTGGCCGGGCGGCGTCCTGGGCCAGTGCCCGCTCCATGGTCAAGCTCATCGG
CATCACGGGCCACGGCATCCCCTGGATCGGAGGCACCATCCTCTGCCTGGTGAAGAGCAGCACACTGGCC
GGCCAGGAGGTGCTCATGAATCTGCTCCTGGCCCTGCTCCTGGACATCATGACGGTGGCCGGCGTGCAGA
AGCTCATCAAGCGGCGCGGCCCGTACGAGACGAGCCCCAGCCTCCTGGACTACCTCACCATGGACATCTA
CGCCTTCCCGGCCGGGCACGCCAGCCGCGCCGCCATGGTGTCCAAGTTCTTCCTCAGCCACCTGGTGCTG
GCGGTGCCCCTGCGTGTGCTGCTGGTGCTCTGGGCCCTCTGCGTGGGCCTGTCCCGCGTGATGATCGGCC
GCCACCACGTCACGGACGTCCTCTCCGGCTTTGTCATCGGCTACCTCCAGTTCCGTCTGGTGGAGCTGGT
CTGGATGCCCTCCAGCACCTGCCAGATGCTCATCTCTGCCTGGTGA

Translation (271 aa):
MPASQSRARARDRNNVLNRAEFLSLNQPPKGGPEPRSSGRKASGPSAQPPPAGDGARERRQSQQLPEEDC
MQLNPSFKGIAFNSLLAIDICMSKRLGVCAGRAASWASARSMVKLIGITGHGIPWIGGTILCLVKSSTLA
GQEVLMNLLLALLLDIMTVAGVQKLIKRRGPYETSPSLLDYLTMDIYAFPAGHASRAAMVSKFFLSHLVL
AVPLRVLLVLWALCVGLSRVMIGRHHVTDVLSGFVIGYLQFRLVELVWMPSSTCQMLISAW


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser

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