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Report for CCDS7142.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7142.1 Public Homo sapiens 10 ARMC3 24 110 108 CCDS HistoryNCBI Gene:219681Re-query CCDS DB by CCDS ID:7142.1Re-query CCDS DB by GeneID:219681See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7142.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000298032.10 ENSP00000298032.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000298032.10Link to Ensembl Protein Viewer:ENSP00000298032.5Re-query CCDS DB by Nucleotide ID:ENST00000298032Re-query CCDS DB by Protein ID:ENSP00000298032
Original member Current member NCBI NM_173081.5 NP_775104.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173081.5Link to Protein Sequence:NP_775104.2Re-query CCDS DB by Nucleotide ID:NM_173081Re-query CCDS DB by Protein ID:NP_775104Link to BLAST:NP_775104.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775104.2 872 Q5W041-2 872 100% 0 0

Chromosomal Locations for CCDS 7142.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 22931997 22932044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22946144 22946261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22955807 22955932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22959070 22959138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22959399 22959574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22961884 22962078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22968306 22968489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22981340 22981492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22981595 22981700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 22998148 22998397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23001919 23002055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23003246 23003414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23006884 23006981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23008276 23008374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23008815 23008931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23030596 23030796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23032861 23033023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 23037270 23037479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2619 nt):
ATGGGTAAAAAGATAAAGAAGGAAGTAGAGCCTCCTCCTAAGGATGTGTTTGACCCATTAATGATTGAAA
GCAAAAAAGCAGCAACTGTGGTGTTAATGCTTAATTCTCCAGAAGAGGAAATTTTGGCTAAAGCATGTGA
AGCCATTTATAAATTTGCTTTAAAAGGTGAGGAAAATAAAACAACCCTCCTTGAACTTGGAGCTGTGGAA
CCTTTAACTAAGCTACTCACCCATGAAGACAAAATTGTAAGAAGAAATGCTACTATGATATTTGGAATCC
TGGCTTCTAATAATGATGTTAAAAAATTGTTAAGGGAGTTAGATGTCATGAATTCTGTCATTGCCCAGCT
CGCTCCAGAAGAAGAAGTAGTTATCCATGAGTTTGCTAGTCTTTGTCTAGCAAACATGTCTGCAGAGTAC
ACCAGTAAAGTGCAAATATTTGAACATGGGGGATTAGAGCCACTCATCAGACTACTGAGTAGCCCTGACC
CGGATGTAAAGAAGAACTCTATGGAATGCATTTACAACTTGGTGCAGGATTTTCAGTGTCGAGCTAAACT
TCAAGAACTAAATGCAATACCTCCTATCTTAGATCTCTTGAAGTCAGAATATCCAGTGATTCAGTTGTTG
GCTCTCAAAACCTTAGGTGTTATTGCAAATGATAAGGAGTCTCGAACAATGCTAAGAGACAATCAAGGAT
TGGACCATCTTATTAAGATCCTAGAAACTAAGGAATTGAATGACCTTCATATAGAAGCACTTGCAGTGAT
AGCCAATTGCCTTGAAGACATGGATACTATGGTGCAGATTCAGCAGACAGGGGGTCTTAAAAAGCTCCTG
TCATTTGCAGAAAACTCTACAATTCCTGATATTCAGAAGAATGCAGCAAAAGCCATTACTAAAGCAGCTT
ATGATCCTGAAAATAGAAAACTTTTTCATGAACAAGAGGTTGAAAAGTGCCTTGTAGCCCTTTTGGGTTC
TGAAAATGATGGAACTAAAATTGCTGCTTCCCAAGCTATTTCAGCAATGTGTGAGAATTCAGGCAGCAAA
GATTTTTTCAATAATCAGGGGATTCCACAGTTAATTCAGTTGCTAAAAAGTGACAATGAAGAGGTACGGG
AAGCAGCAGCTCTAGCCCTGGCAAACCTAACCACTTGCAACCCTGCTAATGCAAACGCTGCTGCTGAAGC
TGATGGTATTGATCCATTAATAAACCTCCTGTCTAGTAAACGAGATGGAGCCATTGCCAACGCTGCTACA
GTATTAACAAACATGGCCATGCAGGAGCCCCTGCGCCTGAACATACAGAATCACGACATCATGCATGCCA
TCATCAGCCCACTGCGTTCTGCAAACACAGTCGTGCAGAGCAAAGCTGCTCTCGCTGTCACCGCAACTGC
GTGTGACGTTGAAGCCCGGACTGAGTTAAGAAATTCTGGTGGATTGGAGCCCCTGGTAGAGCTGCTACGC
TCCAAGAATGATGAAGTGAGGAAGCACGCCAGTTGGGCAGTGATGGTCTGTGCTGGTGACGAGCTGACGG
CCAATGAATTATGCAGGCTCGGGGCTTTAGATATCCTTGAAGAAGTTAACGTATCAGGAACTCGGAAAAA
TAAATTCAGTGAGGCAGCTTATAATAAGTTGCTCAATAACAATCTTTCCCTGAAATACAGCCAGACTGGC
TATTTGTCATCAAGTAACATAATTAACGATGGATTCTATGATTATGGTCGGATAAATCCCGGCACCAAAC
TGTTGCCTTTGAAGGAGCTCTGCTTACAAGAACCAAGTGACCTACGGGCTGTACTCTTAATCAACAGTAA
ATCTTACGTTTCTCCACCTTCATCTATGGAAGATAAATCAGATGTTGGTTATGGACGAAGTATTTCTTCT
TCATCTTCCTTAAGAAGATCAAGTAAAGAAAAGAACAAAAAAAATAGTTATCATTTTAGTGCTGGATTTG
GATCTCCCATAGAAGACAAATCAGAGCCAGCTTCTGGACGAAATACTGTTCTCAGCAAAAGCGCCACCAA
AGAAAAAGGATGGAGGAAAAGCAAAGGAAAAAAAGAAGAGGAAAAAGTGAAAGAGGAGGAAGAGGTTATG
GTGGTACCAAAATTTGTTGGTGAAGGAAGCTCTGACAAAGAATGGTGTCCTCCCTCTGACCCTGATTTCT
CTATGTATGTGTATGAGGTGACCAAATCAATACTGCCAATAACCAATATTAAGGAACAGATTGAGGATCT
GGCAAAGTATGTAGCAGAAAAAATGGGTGGTAAGATTCCAAAAGAGAAACTACCTGATTTCAGCTGGGAA
CTTCACATAAGTGAACTGAAATTTCAACTTAAATCCAATGTTATACCGATTGGACATGTCAAAAAAGGAA
TCTTCTACCATCGAGCTTTGCTTTTCAAGGCTCTGGCTGATAGAATTGGCATTGGTTGCTCCCTAGTTCG
CGGAGAGTACGGTAGAGCGTGGAATGAAGTCATGCTGCAGAATGACTCTCGGAAGGGAGTGATTGGGGGC
CTCCCCGCTCCTGAGATGTACGTGATTGACCTCATGTTCCATCCAGGTGGACTGATGAAGTTGAGAAGTC
GAGAGGCTGATCTTTACAGATTCATTTAA

Translation (872 aa):
MGKKIKKEVEPPPKDVFDPLMIESKKAATVVLMLNSPEEEILAKACEAIYKFALKGEENKTTLLELGAVE
PLTKLLTHEDKIVRRNATMIFGILASNNDVKKLLRELDVMNSVIAQLAPEEEVVIHEFASLCLANMSAEY
TSKVQIFEHGGLEPLIRLLSSPDPDVKKNSMECIYNLVQDFQCRAKLQELNAIPPILDLLKSEYPVIQLL
ALKTLGVIANDKESRTMLRDNQGLDHLIKILETKELNDLHIEALAVIANCLEDMDTMVQIQQTGGLKKLL
SFAENSTIPDIQKNAAKAITKAAYDPENRKLFHEQEVEKCLVALLGSENDGTKIAASQAISAMCENSGSK
DFFNNQGIPQLIQLLKSDNEEVREAAALALANLTTCNPANANAAAEADGIDPLINLLSSKRDGAIANAAT
VLTNMAMQEPLRLNIQNHDIMHAIISPLRSANTVVQSKAALAVTATACDVEARTELRNSGGLEPLVELLR
SKNDEVRKHASWAVMVCAGDELTANELCRLGALDILEEVNVSGTRKNKFSEAAYNKLLNNNLSLKYSQTG
YLSSSNIINDGFYDYGRINPGTKLLPLKELCLQEPSDLRAVLLINSKSYVSPPSSMEDKSDVGYGRSISS
SSSLRRSSKEKNKKNSYHFSAGFGSPIEDKSEPASGRNTVLSKSATKEKGWRKSKGKKEEEKVKEEEEVM
VVPKFVGEGSSDKEWCPPSDPDFSMYVYEVTKSILPITNIKEQIEDLAKYVAEKMGGKIPKEKLPDFSWE
LHISELKFQLKSNVIPIGHVKKGIFYHRALLFKALADRIGIGCSLVRGEYGRAWNEVMLQNDSRKGVIGG
LPAPEMYVIDLMFHPGGLMKLRSREADLYRFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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