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Report for CCDS1744.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1744.1 Public Homo sapiens 2 DNAJC5G 24 110 108 CCDS HistoryNCBI Gene:285126Re-query CCDS DB by CCDS ID:1744.1Re-query CCDS DB by GeneID:285126See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1744.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000296097.8 ENSP00000296097.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000296097.8Link to Ensembl Protein Viewer:ENSP00000296097.3Re-query CCDS DB by Nucleotide ID:ENST00000296097Re-query CCDS DB by Protein ID:ENSP00000296097
Original member Current member EBI ENST00000402462.5 ENSP00000384305.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402462.5Link to Ensembl Protein Viewer:ENSP00000384305.1Re-query CCDS DB by Nucleotide ID:ENST00000402462Re-query CCDS DB by Protein ID:ENSP00000384305
Original member Current member NCBI NM_001303127.2 NP_001290056.1 Accepted alive Link to Nucleotide Sequence:NM_001303127.2Link to Protein Sequence:NP_001290056.1Re-query CCDS DB by Nucleotide ID:NM_001303127Re-query CCDS DB by Protein ID:NP_001290056Link to BLAST:NP_001290056.1
Original member Current member NCBI NM_173650.3 NP_775921.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173650.3Link to Protein Sequence:NP_775921.1Re-query CCDS DB by Nucleotide ID:NM_173650Re-query CCDS DB by Protein ID:NP_775921Link to BLAST:NP_775921.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290056.1 189 Q8N7S2-1 189 100% 0 0
NP_775921.1 189 Q8N7S2-1 189 100% 0 0

Chromosomal Locations for CCDS 1744.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 27276729 27276841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27277754 27278015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27278188 27278332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 27280166 27280215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (570 nt):
ATGTCTACTGTGAAGGAAGCAGCACACCGGCTGTCCAAAAGTGAGATGAGCCTCTATGCAGTGCTGGATC
TTAAGAAGGGCGCCTCACCTGAAGACTTCAAAAAATCCTACAGCCATTCCGCATTGCTTCCCCACCCTCC
TTTTGAGTATCACCTGGGTAGGAAACTGGCCTTGCGGTATCATCCCGACAAGAATCCAGGGAATGCTCAA
GCAGCAGAAATATTCAAAGAGATCAACGCAGCTCATGCCATACTGAGCGACTCTAAGAAGCGGAAAATTT
ACGACCAGCATGGCTCATTGGGAATATATCTGTATGATCACTTTGGTGAAGAAGGCGTCAGATACTATTT
TATTCTGAATAGTTGTTGGTTCAAGACACTTGTCATCCTGTGTACTCTGCTCACTTGTTGCTGTTTCTGT
TGTTGCTGCTGTTTTTGCTGTGGAGCACTTAAACCACCACCTGAGCAGGATAGTGGGAGAAAATATCAGC
AGAATGTCCAGAGTCAGCCTCCAAGGTCAGGAGCCAAATGTGATTTTAGAAGCGAGGAAAATAGCGAAGA
TGATTTTTAA

Translation (189 aa):
MSTVKEAAHRLSKSEMSLYAVLDLKKGASPEDFKKSYSHSALLPHPPFEYHLGRKLALRYHPDKNPGNAQ
AAEIFKEINAAHAILSDSKKRKIYDQHGSLGIYLYDHFGEEGVRYYFILNSCWFKTLVILCTLLTCCCFC
CCCCFCCGALKPPPEQDSGRKYQQNVQSQPPRSGAKCDFRSEENSEDDF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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