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Report for CCDS36357.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36357.1 Public Mus musculus 11 Tanc2 23 108 98 CCDS HistoryNCBI Gene:77097Re-query CCDS DB by CCDS ID:36357.1Re-query CCDS DB by GeneID:77097See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36357.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000100330.9 ENSMUSP00000097904.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000100330.9Link to Ensembl Protein Viewer:ENSMUSP00000097904.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000100330Re-query CCDS DB by Protein ID:ENSMUSP00000097904
Original member Current member NCBI NM_181071.3 NP_851416.2 Accepted alive Link to Nucleotide Sequence:NM_181071.3Link to Protein Sequence:NP_851416.2Re-query CCDS DB by Nucleotide ID:NM_181071Re-query CCDS DB by Protein ID:NP_851416Link to BLAST:NP_851416.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_851416.2 1994 A2A690-1 1994 100% 0 0

Chromosomal Locations for CCDS 36357.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 105625058 105625124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105673420 105673491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105713382 105713453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105776806 105776954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105779939 105780125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105798561 105798824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105810472 105810597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105834949 105835230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105840619 105840752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105857397 105857628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105863917 105864083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105867167 105867774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105886358 105886466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105895846 105895968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105896468 105896704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105899684 105899869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105902060 105902153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105908995 105909128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105910203 105910326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105912912 105913087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105913357 105913489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105914892 105914983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105916914 105917060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105919951 105920051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 105921748 105923716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5985 nt):
ATGTTTCGGAATAGTCTCAAGATGCTTCTTACTGGTGGGAAGTCAAGTCGGAAAAACAGGTCAAGTGATG
GAGGAAGCGAGGAACCACCGGATCGAAGACAGTCGAGTGTAGATTCTCGCCAAAGCCGCTCTGGGCAAGG
TGGCATCTCCACAGAAAGCGATTGTGCTTTTGAGCCAGACTATGCTGTTCCACCACTTCCAGTGAGTGAA
GGTGATGTTGAACAAGAACTTGGCCCACCTCCATCTGTAGATGAGGCAGCAAACACACTCATGACTCGTC
TGGGTTTCCTCCTTGGAGAGAAAGTCACAGAAGTACAACCAAGTGACCAATATAGCATGGAGGTACAGGA
TGAAAATCAGACTTCAGCAATCACCCAGAGAATAAGTCCCTGCTCCACCTTGACTAGCAGCACTGCCTCT
CCACCAGCCAGCAGCCCCTGCTCTACGCTCCCACCAGTCAGTACAAATGCAGCTGCCAAGGACTGTAGCT
ATGGGGCTGTCACCAGCCCCACCTCCACTCTAGAAAGCAGAGACAGTGGCATCATTGCAACATTAACAAA
TTATTCTGAAAACATGGAGCGAACAAAATATGTTGGAGAAGGCAGTAAAGAATTAGGATCTGGAGGAAAC
CTAAAACCATGGCAGTCTCAAAAATCCAGCATGGACTCTTGTCTGTACCGAGTGGATGAAAACATGGCTG
CATCCACATACAGTCTGAACAAGATCCCGGAGCGAAATCTGGAAACAGTTTTATCGCAATCAGTACAGTC
TATTCCGTTGTATCTCATGCCTCGGCCAAATTCTGTAGCAGCCACCAGCTCTGCCCACTTGGAGGATCTT
GCTTACCTGGATGAGCAGAGACACACTCCTTTGAGGACATCCCTTAGAATGCCAAGACAGAGCCTGAGTG
GTGCTCGAACACAGCAGGATCTCAGAGTTCGCTTTGCACCTTACAGACCTCCAGACATCTCCTTGAAGCC
CCTACTCTTCGAAGTGCCCAGCATTACCACGGAGTCAGTGTTTGTTGGTCGAGATTGGGTATTCCATGAG
ATTGATGCTCAGCTTCAGAGTTCTAATGCCAGCGTGAACCAAGGAGTAGTGATTGTGGGAAACATTGGGT
TCGGCAAAACTGCCATCATCTCCAGACTGGTGGCCCTCAGCTGCCATGGTACACGGATGAGACAGATCGC
CTCTGACAGCCCACACGCCTCCCCCAAACATGTGGACGCCAACAGAGAGCTACCACTCACCCAAGCACCT
TCAGCTCACTCATCTATTACCAGTGGAAGCTGCCCAGGAACTCCAGAAATGCGCAGGCGGCAAGAGGAAG
CCATGCGAAGACTTGCCTCACAGGTGGTTGCCTATCACTATTGCCAGGCAGATAATGCCTACACCTGCCT
GGTACCAGAATTCGTCCACAATGTTGCTGCCCTGCTCTGCCGCTCACCTCAGCTGACAGCTTACCGGGAA
CAGCTTCTTCGGGAGCCTCACCTGCAGAGCATGCTAAGCCTCCGGTCCTGTGTTCAAGATCCCATGGCCT
CCTTCCGGAGAGGAGTCCTAGAGCCCTTGGAGAACCTCCACAAAGAGAGAAAAATCCCAGATGAAGATTT
CATCATTTTAATTGATGGATTAAATGAAGCAGAATTTCACAAACCGGATTATGGGGATACAATTGTATCA
TTTCTAAGTAAAATGATTGGAAATTTTCCTTCTTGGCTCAAACTAATTGTAACAGTTAGGACCAGTTTAC
AGGAAATTACCAAGTTGCTGCCTTTCCATAGGATTTTTTTGGATCGACTAGAAGAGAATGAAGCCATAGA
CCAGGACCTGCAGGCTTACATCCTGCACCGGATTCACAGCAGCTCAGAGATCCAGAATAACATCTCACTT
AATGGCAAGATGGACAATACTACATTTGGCAAACTCAGTTCTCACCTCAAGACCCTCAGTCAAGGGTCAT
ATCTATACCTGAAACTCACATTTGACCTCATAGAGAAAGGCTACCTAGTGCTAAAGAGTTCTAGCTACAA
AGTCGTTCCTGTTTCGCTCTCTGAGGTTTATTTACTCCAGTGCAATATGAAGTTCCCAACTCAGTCTTCC
TTTGACCGGGTGATGCCTCTCCTGAATGTGGCAGTAGCCTCTCTCCACCCACTTACGGATGAACATATTT
TCCAGGCCATCAATGCTGGGAGCATTGAAGGCACACTAGAATGGGAAGACTTTCAACAAAGAATGGAGAA
CCTCTCCATGTTCCTCATCAAGCGCAGAGACATGACTCGGATGTTTGTGCATCCTTCTTTTCGAGAATGG
CTTATCTGGAGAGAAGAAGGAGAGAAAACCAAATTTCTCTGTGATCCCAGGAGTGGCCACACATTACTTG
CCTTCTGGTTCTCCCGCCAAGAGGGAAAACTAAACCGACAGCAGACTATTGAACTAGGACATCACATCCT
CAAAGCACACATCTTTAAGGGTTTGAGTAAAAAGGTTGGTGTATCGTCCTCCATCCTCCAAGGCCTCTGG
ATCTCCTACAGCACAGAAGGTCTTTCCATGGCATTGGCCTCTTTACGAAATCTCTACACTCCAAATATAA
AGGTCAGCAGACTGCTGATTCTGGGAGGTGCCAATATTAATTACCGGACAGAGGTTCTAAATAATGCTCC
TATCCTATGTGTCCAGTCTCACCTTGGATACACAGAAATGGTGGCCCTGCTTTTGGAGTTTGGGGCTAAT
GTGGATGCCTCTTCTGAGAGTGGCCTGACTCCCCTGGGGTATGCTGCAGCAGCAGGGTTCCTGAGCATCG
TGGTGTTGCTGTGCAAGAAACGGGCCAAGGTGGATCACTTGGATAAGAATGGACAGTGTGCTTTGGTTCA
TGCTGCTCTGCGAGGTCATCTAGAGGTTGTCAAGTTTCTGATTCAGTGTGACTGGACAATGGCTGGCCAG
CAGCAAGGAGTGTTTAAGAAGAGCCACGCCATCCAGCAGGCCCTCATTGCTGCAGCCAGCATGGGTTACA
CTGAGATTGTCTCCTACCTACTTGATCTTCCAGAAAAAGATGAAGAGGAAGTGGAGCGAGCACAAATCAA
CAGTTTTGACAGTCTCTGGGGAGAGACAGCCCTGACAGCCGCAGCCGGAAGGGGCAAACTGGATGTGTGC
CGTCTGCTTTTGGAGCAAGGGGCAGCAGTGGCCCAGCCAAACCGCAGAGGAGCAGTGCCTCTATTCAGCA
CTGTTCGCCAGGGCCATTGGCAGATTGTTGATCTTTTACTGACCCATGGAGCTGATGTCAACATGGCAGA
CAAGCAGGGTCGTACTCCCCTGATGATGGCTGCTTCTGAAGGCCATCTAGGAACCGTGGACTTCCTACTA
GCACAAGGTGCCTCCATTGCCCTGATGGACAAAGAAGGACTAACAGCCCTTAGCTGGGCTTGTCTGAAGG
GCCATCTCTCAGTAGTACGCTCTCTGGTGGATAACGGGGCTGCTACAGACCATGCAGACAAGAATGGCCG
TACCCCACTGGACCTAGCAGCTTTCTACGGTGATGCTGAGGTGGTCCAGTTCCTGGTAGATCATGGGGCC
ATGATTGAGCATGTTGACTACAGTGGAATGCGTCCTTTGGATAGGGCAGTGGGTTGCCGGAACACGTCTG
TTGTAGTAACTCTACTGAAAAAAGGAGCCAAAATAGGTCCAGCCACATGGGCGATGGCCACCTCCAAACC
AGACATCATGATCATCCTGTTGAGCAAGCTGATGGAAGAGGGGGACATGTTTTATAAGAAAGGGAAAGTA
AAGGAGGCTGCCCAGCGCTACCAGTATGCTCTGAAGAAATTCCCTAGAGAAGGGTTTGGTGAGGACCTGA
AAACCTTCCGGGAGCTAAAAGTGTCTCTCCTCCTCAACCTCTCTCGATGTCGCAGGAAAATGAACGATTT
TGGAATGGCGGAGGAATTTGCTACTAAAGCCCTGGAGCTGAAACCGAAATCTTATGAAGCATACTATGCG
AGAGCAAGGGCAAAACGCAGCAGCAGACAGTTTGCAGCAGCCCTAGAGGACCTGAAAGAGGCCATCAAGC
TATGTCCCAACAACCGTGAGATCCAGAGGCTTCTGATGCGAGTGGAGGAAGAGTGCAGACAGATGCAGCA
GCAGCAGCAGCAGCAGCCACCACCCCCACCCCAGCAGCCTCCGCAGGAGTTGCCAGAGGAAGAAACAGAG
CCTGAGCCCCAGCATGAAGATATATACTCTGTACAGGACATATTTGAGGAGGAATACTTGGAACAAGATG
TTGAAAATGTTTCTATTGGCCTCCAGACAGAGGCTCGCCCCAGTCAGGGGCTCCCAGTAATCCAGAGCCC
ACCCTCCTCTCCAGCCCATCGGGACTCGGCCTACATCTCTAGCTCACCTCTTGGCTCTCATCAGGTTTTT
GACTTCCGGTCCAATAGTTCTGTAGGTTCCCCCACTAGACAAGGTTATCAGTCCACTTCGCCTGCTCTTT
CTCCAACTCACCAGAACTCTCATTACAGGCCTAGCCCACCACATACTTCTCCAGCTCATCAGGGTGCATC
TTACCGGTTCAGCCCACCTCCTGTGGGAGGGCAAAGCAAGGAATACCCTAGCCCTCCCCCTTCCCCTCTC
CGTAGAGGCCCTCAGTATAGGGCCAGTCCTCCAGCTGAGAGCATGAGTGTCTATAGATCCCAGTCTGGCT
CACCTGTACGCTATCAGCAAGAAACAAATGTGAGTCAGCTTCCTGGCAGACCAAAATCTCCACTATCCAA
AATGGCCCAGCGGCCCTACCAGATGCCTCAGCTTCCAGTGGCAGTTCCCCAGCAAGGTCTCAGGCTACAG
CCTGCCAAGGCCCAGATTGTAAGAAGTAACCAGCCTAGCTCAGCAGTTCATTCAAGCACTGTAATCCCAA
CAGGAGCCTATGGCCAAGTAGCCCATTCAATGGCCAGTAAATACCAGTCTTCACAAGGAGACATGGGAGT
AAGTCAGAGCCGATTGGTTTATCAGGGATCAATAGGGGGGATTGTAGGAGATGGGAGACCTGTACAGCAT
GTCCAAGCCAGTCTGAGTGCTGGTGCCATCTGTCAGCATGGAGGATTGACCAAAGAAGACCTGCCACAGC
GACCCTCCTCTGCCTATCGAGGTGGTATGAGGTACAGCCAGACACCACAGATTGGGCGTAGCCAATCAGC
GTCATATTATCCAGTCTGTCACTCAAAACTAGATCTGGAGCGTTCCTCCAGCCAGCTGGGTTCCCCCGAT
GTGTCACATTTAATCAGAAGACCTATCAGTGTCAACCCTAATGAAATCAAGCCCCACCCACCAACTCCCA
GGCCGCTGCTGCACTCACAGAGTGTGGGCCTGCGCTTTTCTCCATCCAGCAATAGCATCTCATCCACCTC
CAACCTGACTCCCACCTTCCGGCCTTCTTCTTCAATTCAGCAAATGGAGATCCCACTAAAACCGGCATAT
GATAGGTCATGTGATGAGCTATCACCAGTATCTCCCACTCAGGGAGGTTATCCTAGTGAGCCTACCCGAT
CCAGGACCACACCATTCATGGGGATCATAGATAAAACAGCCCGGACTCAACAGTACCCCCACCTTCACCA
GCAGAATCGGACCTGGGCAGTCTCATCAGTGGATACGGTTCTCAGTCCCACGTCTCCAGGCAACCTGCCT
CAGCCTGAATCCTTCAGTCCACCATCATCCATCAGCAACATTGCCTTTTATAACAAAACCAACAATGCAC
AGAATGGCCATTTGCTGGAGGACGATTATTACAGCCCCCATGGGATGCTGGCTAATGGGTCTCGTGGAGA
CCTCTTGGAAAGAGTCAGCCAGGCCTCCTCTTATCCTGATGTGAAGGTGGCACGGACCCTACCAGTGGCT
CAGGCATACCAGGACAACCTGTACAGGCAATTGTCTCGGGACTCTCGACAAGGGCAGACATCGCCCATCA
AACCAAAGAGACCATTTGTGGAGTCTAATGTTTAA

Translation (1994 aa):
MFRNSLKMLLTGGKSSRKNRSSDGGSEEPPDRRQSSVDSRQSRSGQGGISTESDCAFEPDYAVPPLPVSE
GDVEQELGPPPSVDEAANTLMTRLGFLLGEKVTEVQPSDQYSMEVQDENQTSAITQRISPCSTLTSSTAS
PPASSPCSTLPPVSTNAAAKDCSYGAVTSPTSTLESRDSGIIATLTNYSENMERTKYVGEGSKELGSGGN
LKPWQSQKSSMDSCLYRVDENMAASTYSLNKIPERNLETVLSQSVQSIPLYLMPRPNSVAATSSAHLEDL
AYLDEQRHTPLRTSLRMPRQSLSGARTQQDLRVRFAPYRPPDISLKPLLFEVPSITTESVFVGRDWVFHE
IDAQLQSSNASVNQGVVIVGNIGFGKTAIISRLVALSCHGTRMRQIASDSPHASPKHVDANRELPLTQAP
SAHSSITSGSCPGTPEMRRRQEEAMRRLASQVVAYHYCQADNAYTCLVPEFVHNVAALLCRSPQLTAYRE
QLLREPHLQSMLSLRSCVQDPMASFRRGVLEPLENLHKERKIPDEDFIILIDGLNEAEFHKPDYGDTIVS
FLSKMIGNFPSWLKLIVTVRTSLQEITKLLPFHRIFLDRLEENEAIDQDLQAYILHRIHSSSEIQNNISL
NGKMDNTTFGKLSSHLKTLSQGSYLYLKLTFDLIEKGYLVLKSSSYKVVPVSLSEVYLLQCNMKFPTQSS
FDRVMPLLNVAVASLHPLTDEHIFQAINAGSIEGTLEWEDFQQRMENLSMFLIKRRDMTRMFVHPSFREW
LIWREEGEKTKFLCDPRSGHTLLAFWFSRQEGKLNRQQTIELGHHILKAHIFKGLSKKVGVSSSILQGLW
ISYSTEGLSMALASLRNLYTPNIKVSRLLILGGANINYRTEVLNNAPILCVQSHLGYTEMVALLLEFGAN
VDASSESGLTPLGYAAAAGFLSIVVLLCKKRAKVDHLDKNGQCALVHAALRGHLEVVKFLIQCDWTMAGQ
QQGVFKKSHAIQQALIAAASMGYTEIVSYLLDLPEKDEEEVERAQINSFDSLWGETALTAAAGRGKLDVC
RLLLEQGAAVAQPNRRGAVPLFSTVRQGHWQIVDLLLTHGADVNMADKQGRTPLMMAASEGHLGTVDFLL
AQGASIALMDKEGLTALSWACLKGHLSVVRSLVDNGAATDHADKNGRTPLDLAAFYGDAEVVQFLVDHGA
MIEHVDYSGMRPLDRAVGCRNTSVVVTLLKKGAKIGPATWAMATSKPDIMIILLSKLMEEGDMFYKKGKV
KEAAQRYQYALKKFPREGFGEDLKTFRELKVSLLLNLSRCRRKMNDFGMAEEFATKALELKPKSYEAYYA
RARAKRSSRQFAAALEDLKEAIKLCPNNREIQRLLMRVEEECRQMQQQQQQQPPPPPQQPPQELPEEETE
PEPQHEDIYSVQDIFEEEYLEQDVENVSIGLQTEARPSQGLPVIQSPPSSPAHRDSAYISSSPLGSHQVF
DFRSNSSVGSPTRQGYQSTSPALSPTHQNSHYRPSPPHTSPAHQGASYRFSPPPVGGQSKEYPSPPPSPL
RRGPQYRASPPAESMSVYRSQSGSPVRYQQETNVSQLPGRPKSPLSKMAQRPYQMPQLPVAVPQQGLRLQ
PAKAQIVRSNQPSSAVHSSTVIPTGAYGQVAHSMASKYQSSQGDMGVSQSRLVYQGSIGGIVGDGRPVQH
VQASLSAGAICQHGGLTKEDLPQRPSSAYRGGMRYSQTPQIGRSQSASYYPVCHSKLDLERSSSQLGSPD
VSHLIRRPISVNPNEIKPHPPTPRPLLHSQSVGLRFSPSSNSISSTSNLTPTFRPSSSIQQMEIPLKPAY
DRSCDELSPVSPTQGGYPSEPTRSRTTPFMGIIDKTARTQQYPHLHQQNRTWAVSSVDTVLSPTSPGNLP
QPESFSPPSSISNIAFYNKTNNAQNGHLLEDDYYSPHGMLANGSRGDLLERVSQASSYPDVKVARTLPVA
QAYQDNLYRQLSRDSRQGQTSPIKPKRPFVESNV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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