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Report for CCDS2834.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2834.1 Public Homo sapiens 3 GRM2 24 110 108 CCDS HistoryNCBI Gene:2912Re-query CCDS DB by CCDS ID:2834.1Re-query CCDS DB by GeneID:2912See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2834.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395052.8 ENSP00000378492.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395052.8Link to Ensembl Protein Viewer:ENSP00000378492.3Re-query CCDS DB by Nucleotide ID:ENST00000395052Re-query CCDS DB by Protein ID:ENSP00000378492
Original member Current member NCBI NM_000839.5 NP_000830.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000839.5Link to Protein Sequence:NP_000830.2Re-query CCDS DB by Nucleotide ID:NM_000839Re-query CCDS DB by Protein ID:NP_000830Link to BLAST:NP_000830.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000830.2 872 Q14416 872 100% 0 0

Chromosomal Locations for CCDS 2834.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 51708984 51709433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51712473 51713310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51715062 51716137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51717637 51717817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 51718039 51718112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2619 nt):
ATGGGATCGCTGCTTGCGCTCCTGGCACTGCTGCTGCTGTGGGGTGCTGTGGCTGAGGGCCCAGCCAAGA
AGGTGCTGACCCTGGAGGGAGACTTGGTGCTGGGTGGGCTGTTCCCAGTGCACCAGAAGGGCGGCCCAGC
AGAGGACTGTGGTCCTGTCAATGAGCACCGTGGCATCCAGCGCCTGGAGGCCATGCTTTTTGCACTGGAC
CGCATCAACCGTGACCCGCACCTGCTGCCTGGCGTGCGCCTGGGTGCACACATCCTCGACAGTTGCTCCA
AGGACACACATGCGCTGGAGCAGGCACTGGACTTTGTGCGTGCCTCACTCAGCCGTGGTGCTGATGGCTC
ACGCCACATCTGCCCCGACGGCTCTTATGCGACCCATGGTGATGCTCCCACTGCCATCACTGGTGTTATT
GGCGGTTCCTACAGTGATGTCTCCATCCAGGTGGCCAACCTCTTGAGGCTATTTCAGATCCCACAGATTA
GCTACGCCTCTACCAGTGCCAAGCTGAGTGACAAGTCCCGCTATGACTACTTTGCCCGCACAGTGCCTCC
TGACTTCTTCCAAGCCAAGGCCATGGCTGAGATTCTCCGCTTCTTCAACTGGACCTATGTGTCCACTGTG
GCGTCTGAGGGCGACTATGGCGAGACAGGCATTGAGGCCTTTGAGCTAGAGGCTCGTGCCCGCAACATCT
GTGTGGCCACCTCGGAGAAAGTGGGCCGTGCCATGAGCCGCGCGGCCTTTGAGGGTGTGGTGCGAGCCCT
GCTGCAGAAGCCCAGTGCCCGCGTGGCTGTCCTGTTCACCCGTTCTGAGGATGCCCGGGAGCTGCTTGCT
GCCAGCCAGCGCCTCAATGCCAGCTTCACCTGGGTGGCCAGTGATGGTTGGGGGGCCCTGGAGAGTGTGG
TGGCAGGCAGTGAGGGGGCTGCTGAGGGTGCTATCACCATCGAGCTGGCCTCCTACCCCATCAGTGACTT
TGCCTCCTACTTCCAGAGCCTGGACCCTTGGAACAACAGCCGGAACCCCTGGTTCCGTGAATTCTGGGAG
CAGAGGTTCCGCTGCAGCTTCCGGCAGCGAGACTGCGCAGCCCACTCTCTCCGGGCTGTGCCCTTTGAGC
AGGAGTCCAAGATCATGTTTGTGGTCAATGCAGTGTACGCCATGGCCCATGCGCTCCACAACATGCACCG
TGCCCTCTGCCCCAACACCACCCGGCTCTGTGACGCGATGCGGCCAGTTAACGGGCGCCGCCTCTACAAG
GACTTTGTGCTCAACGTCAAGTTTGATGCCCCCTTTCGCCCAGCTGACACCCACAATGAGGTCCGCTTTG
ACCGCTTTGGTGATGGTATTGGCCGCTACAACATCTTCACCTATCTGCGTGCAGGCAGTGGGCGCTATCG
CTACCAGAAGGTGGGCTACTGGGCAGAAGGCTTGACTCTGGACACCAGCCTCATCCCATGGGCCTCACCC
TCAGCCGGCCCCCTGCCCGCCTCTCGCTGCAGTGAGCCCTGCCTCCAGAATGAGGTGAAGAGTGTGCAGC
CGGGCGAAGTCTGCTGCTGGCTCTGCATTCCGTGCCAGCCCTATGAGTACCGATTGGACGAATTCACTTG
CGCTGATTGTGGCCTGGGCTACTGGCCCAATGCCAGCCTGACTGGCTGCTTCGAACTGCCCCAGGAGTAC
ATCCGCTGGGGCGATGCCTGGGCTGTGGGACCTGTCACCATCGCCTGCCTCGGTGCCCTGGCCACCCTCT
TTGTGCTGGGTGTCTTTGTGCGGCACAATGCCACACCAGTGGTCAAGGCCTCAGGTCGGGAGCTCTGCTA
CATCCTGCTGGGTGGTGTCTTCCTCTGCTACTGCATGACCTTCATCTTCATTGCCAAGCCATCCACGGCA
GTGTGTACCTTACGGCGTCTTGGTTTGGGCACTGCCTTCTCTGTCTGCTACTCAGCCCTGCTCACCAAGA
CCAACCGCATTGCACGCATCTTCGGTGGGGCCCGGGAGGGTGCCCAGCGGCCACGCTTCATCAGTCCTGC
CTCACAGGTGGCCATCTGCCTGGCACTTATCTCGGGCCAGCTGCTCATCGTGGTCGCCTGGCTGGTGGTG
GAGGCACCGGGCACAGGCAAGGAGACAGCCCCCGAACGGCGGGAGGTGGTGACACTGCGCTGCAACCACC
GCGATGCAAGTATGTTGGGCTCGCTGGCCTACAATGTGCTCCTCATCGCGCTCTGCACGCTTTATGCCTT
CAAGACTCGCAAGTGCCCCGAAAACTTCAACGAGGCCAAGTTCATTGGCTTCACCATGTACACCACCTGC
ATCATCTGGCTGGCATTCCTGCCCATCTTCTATGTCACCTCCAGTGACTACCGGGTACAGACCACCACCA
TGTGCGTGTCAGTCAGCCTCAGCGGCTCCGTGGTGCTTGGCTGCCTCTTTGCGCCCAAGCTGCACATCAT
CCTCTTCCAGCCGCAGAAGAACGTGGTTAGCCACCGGGCACCCACCAGCCGCTTTGGCAGTGCTGCTGCC
AGGGCCAGCTCCAGCCTTGGCCAAGGGTCTGGCTCCCAGTTTGTCCCCACTGTTTGCAATGGCCGTGAGG
TGGTGGACTCGACAACGTCATCGCTTTGA

Translation (872 aa):
MGSLLALLALLLLWGAVAEGPAKKVLTLEGDLVLGGLFPVHQKGGPAEDCGPVNEHRGIQRLEAMLFALD
RINRDPHLLPGVRLGAHILDSCSKDTHALEQALDFVRASLSRGADGSRHICPDGSYATHGDAPTAITGVI
GGSYSDVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFFQAKAMAEILRFFNWTYVSTV
ASEGDYGETGIEAFELEARARNICVATSEKVGRAMSRAAFEGVVRALLQKPSARVAVLFTRSEDARELLA
ASQRLNASFTWVASDGWGALESVVAGSEGAAEGAITIELASYPISDFASYFQSLDPWNNSRNPWFREFWE
QRFRCSFRQRDCAAHSLRAVPFEQESKIMFVVNAVYAMAHALHNMHRALCPNTTRLCDAMRPVNGRRLYK
DFVLNVKFDAPFRPADTHNEVRFDRFGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWASP
SAGPLPASRCSEPCLQNEVKSVQPGEVCCWLCIPCQPYEYRLDEFTCADCGLGYWPNASLTGCFELPQEY
IRWGDAWAVGPVTIACLGALATLFVLGVFVRHNATPVVKASGRELCYILLGGVFLCYCMTFIFIAKPSTA
VCTLRRLGLGTAFSVCYSALLTKTNRIARIFGGAREGAQRPRFISPASQVAICLALISGQLLIVVAWLVV
EAPGTGKETAPERREVVTLRCNHRDASMLGSLAYNVLLIALCTLYAFKTRKCPENFNEAKFIGFTMYTTC
IIWLAFLPIFYVTSSDYRVQTTTMCVSVSLSGSVVLGCLFAPKLHIILFQPQKNVVSHRAPTSRFGSAAA
RASSSLGQGSGSQFVPTVCNGREVVDSTTSSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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