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Report for CCDS9574.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9574.1 Public Homo sapiens 14 SLC7A7 24 110 108 CCDS HistoryNCBI Gene:9056Re-query CCDS DB by CCDS ID:9574.1Re-query CCDS DB by GeneID:9056See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9574.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285850.11 ENSP00000285850.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000285850.11Link to Ensembl Protein Viewer:ENSP00000285850.7Re-query CCDS DB by Nucleotide ID:ENST00000285850Re-query CCDS DB by Protein ID:ENSP00000285850
Original member Current member EBI ENST00000397528.8 ENSP00000380662.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397528.8Link to Ensembl Protein Viewer:ENSP00000380662.4Re-query CCDS DB by Nucleotide ID:ENST00000397528Re-query CCDS DB by Protein ID:ENSP00000380662
Original member Current member EBI ENST00000397529.6 ENSP00000380663.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397529.6Link to Ensembl Protein Viewer:ENSP00000380663.2Re-query CCDS DB by Nucleotide ID:ENST00000397529Re-query CCDS DB by Protein ID:ENSP00000380663
Original member Current member EBI ENST00000397532.9 ENSP00000380666.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000397532.9Link to Ensembl Protein Viewer:ENSP00000380666.4Re-query CCDS DB by Nucleotide ID:ENST00000397532Re-query CCDS DB by Protein ID:ENSP00000380666
Original member Current member EBI ENST00000555702.5 ENSP00000451881.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555702.5Link to Ensembl Protein Viewer:ENSP00000451881.1Re-query CCDS DB by Nucleotide ID:ENST00000555702Re-query CCDS DB by Protein ID:ENSP00000451881
Original member Current member EBI ENST00000555911.2 ENSP00000452551.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000555911.2Link to Ensembl Protein Viewer:ENSP00000452551.2Re-query CCDS DB by Nucleotide ID:ENST00000555911Re-query CCDS DB by Protein ID:ENSP00000452551
Original member Current member EBI ENST00000674313.1 ENSP00000501493.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000674313.1Link to Ensembl Protein Viewer:ENSP00000501493.1Re-query CCDS DB by Nucleotide ID:ENST00000674313Re-query CCDS DB by Protein ID:ENSP00000501493
Original member Current member NCBI NM_001126105.3 NP_001119577.1 Accepted alive Link to Nucleotide Sequence:NM_001126105.3Link to Protein Sequence:NP_001119577.1Re-query CCDS DB by Nucleotide ID:NM_001126105Re-query CCDS DB by Protein ID:NP_001119577Link to BLAST:NP_001119577.1
Original member Current member NCBI NM_001126106.4 NP_001119578.1 Accepted alive Link to Nucleotide Sequence:NM_001126106.4Link to Protein Sequence:NP_001119578.1Re-query CCDS DB by Nucleotide ID:NM_001126106Re-query CCDS DB by Protein ID:NP_001119578Link to BLAST:NP_001119578.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001119577.1 511 Q9UM01 511 100% 0 0
NP_001119578.1 511 Q9UM01 511 100% 0 0

Chromosomal Locations for CCDS 9574.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 22773610 22773716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22773933 22774116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22774354 22774503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22775444 22775540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22775833 22775936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22776195 22776318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22778793 22778937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22779926 22780051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 22812900 22813398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1536 nt):
ATGGTTGACAGCACTGAGTATGAAGTGGCCTCCCAGCCTGAGGTGGAAACCTCCCCTTTGGGTGATGGGG
CCAGCCCAGGGCCGGAGCAGGTGAAGCTGAAGAAGGAGATCTCACTGCTTAACGGCGTGTGCCTGATTGT
GGGGAACATGATCGGCTCGGGCATCTTTGTTTCCCCCAAGGGTGTGCTCATATACAGTGCCTCCTTTGGT
CTCTCTCTGGTCATCTGGGCTGTCGGGGGCCTCTTCTCCGTCTTTGGGGCCCTTTGTTATGCGGAACTGG
GCACCACCATTAAGAAATCTGGGGCCAGCTATGCCTATATCCTGGAGGCCTTTGGAGGATTCCTTGCTTT
CATCAGACTCTGGACCTCCCTGCTCATCATTGAGCCCACCAGCCAGGCCATCATTGCCATCACCTTTGCC
AACTACATGGTACAGCCTCTCTTCCCGAGCTGCTTCGCCCCTTATGCTGCCAGCCGCCTGCTGGCTGCTG
CCTGCATTTGTCTCTTAACCTTCATTAACTGTGCCTATGTCAAATGGGGAACCCTGGTACAAGATATTTT
CACCTATGCTAAAGTATTGGCACTGATCGCGGTCATCGTTGCAGGCATTGTTAGACTTGGCCAGGGAGCC
TCTACTCATTTTGAGAATTCCTTTGAGGGTTCATCATTTGCAGTGGGTGACATTGCCCTGGCACTGTACT
CAGCTCTGTTCTCCTACTCAGGCTGGGACACCCTCAACTATGTCACTGAAGAGATCAAGAATCCTGAGAG
GAACCTGCCCCTCTCCATTGGCATCTCCATGCCCATTGTCACCATCATCTATATCTTGACCAATGTGGCC
TATTATACTGTGCTAGACATGAGAGACATCTTGGCCAGTGATGCTGTTGCTGTGACTTTTGCAGATCAGA
TATTTGGAATATTTAACTGGATAATTCCACTGTCAGTTGCATTATCCTGTTTTGGTGGCCTCAATGCCTC
CATTGTGGCTGCTTCTAGGCTTTTCTTTGTGGGCTCAAGAGAAGGCCATCTCCCTGATGCCATCTGCATG
ATCCATGTTGAGCGGTTCACACCAGTGCCTTCTCTGCTCTTCAATGGTATCATGGCATTGATCTACTTGT
GCGTGGAAGACATCTTCCAGCTCATTAACTACTACAGCTTCAGCTACTGGTTCTTTGTGGGGCTTTCTAT
TGTGGGTCAGCTTTATCTGCGCTGGAAGGAGCCTGATCGACCTCGTCCCCTCAAGCTCAGCGTTTTCTTC
CCGATTGTCTTCTGCCTCTGCACCATCTTCCTGGTGGCTGTTCCACTTTACAGTGATACTATCAACTCCC
TCATCGGCATTGCCATTGCCCTCTCAGGCCTGCCCTTTTACTTCCTCATCATCAGAGTGCCAGAACATAA
GCGACCGCTTTACCTCCGAAGGATCGTGGGGTCTGCCACAAGGTACCTCCAGGTCCTGTGTATGTCAGTT
GCTGCAGAAATGGATTTGGAAGATGGAGGAGAGATGCCCAAGCAACGGGATCCCAAATCTAACTAA

Translation (511 aa):
MVDSTEYEVASQPEVETSPLGDGASPGPEQVKLKKEISLLNGVCLIVGNMIGSGIFVSPKGVLIYSASFG
LSLVIWAVGGLFSVFGALCYAELGTTIKKSGASYAYILEAFGGFLAFIRLWTSLLIIEPTSQAIIAITFA
NYMVQPLFPSCFAPYAASRLLAAACICLLTFINCAYVKWGTLVQDIFTYAKVLALIAVIVAGIVRLGQGA
STHFENSFEGSSFAVGDIALALYSALFSYSGWDTLNYVTEEIKNPERNLPLSIGISMPIVTIIYILTNVA
YYTVLDMRDILASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAICM
IHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSFSYWFFVGLSIVGQLYLRWKEPDRPRPLKLSVFF
PIVFCLCTIFLVAVPLYSDTINSLIGIAIALSGLPFYFLIIRVPEHKRPLYLRRIVGSATRYLQVLCMSV
AAEMDLEDGGEMPKQRDPKSN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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