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Report for CCDS14040.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14040.1 Public Homo sapiens 22 CYB5R3 24 110 108 CCDS HistoryNCBI Gene:1727Re-query CCDS DB by CCDS ID:14040.1Re-query CCDS DB by GeneID:1727See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 14040.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407623.8 ENSP00000384834.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000407623.8Link to Ensembl Protein Viewer:ENSP00000384834.3Re-query CCDS DB by Nucleotide ID:ENST00000407623Re-query CCDS DB by Protein ID:ENSP00000384834
Original member Current member EBI ENST00000402438.6 ENSP00000385679.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000402438.6Link to Ensembl Protein Viewer:ENSP00000385679.1Re-query CCDS DB by Nucleotide ID:ENST00000402438Re-query CCDS DB by Protein ID:ENSP00000385679
Original member Current member EBI ENST00000687198.1 ENSP00000508492.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000687198.1Link to Ensembl Protein Viewer:ENSP00000508492.1Re-query CCDS DB by Nucleotide ID:ENST00000687198Re-query CCDS DB by Protein ID:ENSP00000508492
Original member Current member EBI ENST00000692152.1 ENSP00000509317.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000692152.1Link to Ensembl Protein Viewer:ENSP00000509317.1Re-query CCDS DB by Nucleotide ID:ENST00000692152Re-query CCDS DB by Protein ID:ENSP00000509317
Original member Current member NCBI NM_001129819.2 NP_001123291.1 Accepted alive Link to Nucleotide Sequence:NM_001129819.2Link to Protein Sequence:NP_001123291.1Re-query CCDS DB by Nucleotide ID:NM_001129819Re-query CCDS DB by Protein ID:NP_001123291Link to BLAST:NP_001123291.1
Original member Current member NCBI NM_001171661.1 NP_001165132.1 Accepted alive Link to Nucleotide Sequence:NM_001171661.1Link to Protein Sequence:NP_001165132.1Re-query CCDS DB by Nucleotide ID:NM_001171661Re-query CCDS DB by Protein ID:NP_001165132Link to BLAST:NP_001165132.1
Original member Current member NCBI NM_007326.4 NP_015565.1 Accepted alive Link to Nucleotide Sequence:NM_007326.4Link to Protein Sequence:NP_015565.1Re-query CCDS DB by Nucleotide ID:NM_007326Re-query CCDS DB by Protein ID:NP_015565Link to BLAST:NP_015565.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123291.1 278 P00387-2 278 100% 0 0
NP_001165132.1 278 P00387-2 278 100% 0 0
NP_015565.1 278 P00387-2 278 100% 0 0

Chromosomal Locations for CCDS 14040.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 42619773 42619945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42623789 42623888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42627304 42627389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42627605 42627688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42628152 42628281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42630882 42630988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42631378 42631450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 42636715 42636798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (837 nt):
ATGAAGCTGTTCCAGCGCTCCACGCCAGCCATCACCCTCGAGAGCCCGGACATCAAGTACCCGCTGCGGC
TCATCGACCGGGAGATCATCAGCCATGACACCCGGCGCTTCCGCTTTGCCCTGCCGTCACCCCAGCACAT
CCTGGGCCTCCCTGTCGGCCAGCACATCTACCTCTCGGCTCGAATTGATGGAAACCTGGTCGTCCGGCCC
TATACACCCATCTCCAGCGATGATGACAAGGGCTTCGTGGACCTGGTCATCAAGGTTTACTTCAAGGACA
CCCATCCCAAGTTTCCCGCTGGAGGGAAGATGTCTCAGTACCTGGAGAGCATGCAGATTGGAGACACCAT
TGAGTTCCGGGGCCCCAGTGGGCTGCTGGTCTACCAGGGCAAAGGGAAGTTCGCCATCCGACCTGACAAA
AAGTCCAACCCTATCATCAGGACAGTGAAGTCTGTGGGCATGATCGCGGGAGGGACAGGCATCACCCCGA
TGCTGCAGGTGATCCGCGCCATCATGAAGGACCCTGATGACCACACTGTGTGCCACCTGCTCTTTGCCAA
CCAGACCGAGAAGGACATCCTGCTGCGACCTGAGCTGGAGGAACTCAGGAACAAACATTCTGCACGCTTC
AAGCTCTGGTACACGCTGGACAGAGCCCCTGAAGCCTGGGACTACGGCCAGGGCTTCGTGAATGAGGAGA
TGATCCGGGACCACCTTCCACCCCCAGAGGAGGAGCCGCTGGTGCTGATGTGTGGCCCCCCACCCATGAT
CCAGTACGCCTGCCTTCCCAACCTGGACCACGTGGGCCACCCCACGGAGCGCTGCTTCGTCTTCTGA

Translation (278 aa):
MKLFQRSTPAITLESPDIKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRP
YTPISSDDDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGDTIEFRGPSGLLVYQGKGKFAIRPDK
KSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTEKDILLRPELEELRNKHSARF
KLWYTLDRAPEAWDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQYACLPNLDHVGHPTERCFVF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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