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Report for CCDS12797.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12797.1 |
Public |
Homo sapiens |
19 |
JOSD2 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:126119](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12797.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:126119](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12797.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000598418.6 |
ENSP00000468956.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000598418.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000468956.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000598418](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000468956](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000601423.5 |
ENSP00000472116.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000601423.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000472116.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000601423](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000472116](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001270639.2 |
NP_001257568.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001270639.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001257568.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001270639](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001257568](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001257568.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001270640.2 |
NP_001257569.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001270640.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001257569.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001270640](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001257569](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001257569.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001270686.2 |
NP_001257615.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001270686.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001257615.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001270686](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001257615](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001257615.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_138334.4 |
NP_612207.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_138334.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_612207.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_138334](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_612207](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_612207.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12797.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (567 nt): ATGTCCCAGGCCCCGGGAGCACAGCCGAGCCCACCCACCGTGTACCACGAACGGCAGCGCCTGGAGCTGT GTGCTGTCCACGCCCTCAACAACGTTCTGCAGCAGCAGCTCTTTAGCCAGGAGGCTGCCGATGAGATCTG CAAGAGGTTGGCCCCAGACTCCCGGCTGAACCCTCATCGCAGCCTCCTGGGCACCGGCAACTATGATGTC AATGTGATCATGGCCGCTCTGCAGGGGCTGGGCCTGGCCGCCGTGTGGTGGGACAGGAGGAGGCCCCTGT CCCAGCTGGCCCTGCCCCAGGTACTGGGGCTGATCCTGAACCTGCCCTCGCCCGTGTCGCTGGGGCTGCT GTCACTGCCGCTGCGCCGGCGGCACTGGGTGGCCCTGCGCCAGGTGGACGGTGTCTACTACAACCTGGAC TCCAAGCTGCGGGCGCCCGAGGCCCTGGGGGATGAGGACGGAGTCAGGGCCTTCCTGGCGGCTGCGCTGG CCCAGGGCCTGTGCGAGGTGCTGCTGGTAGTGACCAAGGAGGTGGAGGAGAAGGGCAGCTGGCTGCGGAC AGACTGA
Translation (188 aa): MSQAPGAQPSPPTVYHERQRLELCAVHALNNVLQQQLFSQEAADEICKRLAPDSRLNPHRSLLGTGNYDV NVIMAALQGLGLAAVWWDRRRPLSQLALPQVLGLILNLPSPVSLGLLSLPLRRRHWVALRQVDGVYYNLD SKLRAPEALGDEDGVRAFLAAALAQGLCEVLLVVTKEVEEKGSWLRTD
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