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Report for CCDS1776.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1776.1 Public Homo sapiens 2 MEMO1 24 110 108 CCDS HistoryNCBI Gene:51072Re-query CCDS DB by CCDS ID:1776.1Re-query CCDS DB by GeneID:51072See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1776.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000295065.9 ENSP00000295065.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000295065.9Link to Ensembl Protein Viewer:ENSP00000295065.4Re-query CCDS DB by Nucleotide ID:ENST00000295065Re-query CCDS DB by Protein ID:ENSP00000295065
Original member Current member EBI ENST00000404530.6 ENSP00000385557.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000404530.6Link to Ensembl Protein Viewer:ENSP00000385557.1Re-query CCDS DB by Nucleotide ID:ENST00000404530Re-query CCDS DB by Protein ID:ENSP00000385557
Original member Current member NCBI NM_001301833.4 NP_001288762.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001301833.4Link to Protein Sequence:NP_001288762.1Re-query CCDS DB by Nucleotide ID:NM_001301833Re-query CCDS DB by Protein ID:NP_001288762Link to BLAST:NP_001288762.1
Original member Current member NCBI NM_001371914.2 NP_001358843.1 Accepted alive Link to Nucleotide Sequence:NM_001371914.2Link to Protein Sequence:NP_001358843.1Re-query CCDS DB by Nucleotide ID:NM_001371914Re-query CCDS DB by Protein ID:NP_001358843Link to BLAST:NP_001358843.1
Original member Current member NCBI NM_015955.5 NP_057039.1 Accepted alive Link to Nucleotide Sequence:NM_015955.5Link to Protein Sequence:NP_057039.1Re-query CCDS DB by Nucleotide ID:NM_015955Re-query CCDS DB by Protein ID:NP_057039Link to BLAST:NP_057039.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001288762.1 297 Q9Y316-1 297 100% 0 0
NP_001358843.1 297 Q9Y316-1 297 100% 0 0
NP_057039.1 297 Q9Y316-1 297 100% 0 0

Chromosomal Locations for CCDS 1776.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 31868361 31868492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31869848 31869952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31883386 31883462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31891992 31892134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31917926 31918037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31920798 31920910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31932067 31932135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 31943302 31943383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 32010187 32010247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (894 nt):
ATGTCCAACCGAGTGGTCTGCCGAGAAGCCAGTCACGCCGGGAGCTGGTACACAGCCTCAGGACCGCAGC
TGAATGCACAGCTAGAAGGTTGGCTTTCACAAGTACAGTCTACAAAAAGACCTGCTAGAGCCATTATTGC
CCCCCATGCAGGATATACGTACTGTGGGTCTTGTGCTGCCCATGCTTATAAACAAGTGGATCCGTCTATT
ACCCGGAGAATTTTCATCCTTGGGCCTTCTCATCATGTGCCCCTCTCTCGATGTGCACTTTCCAGTGTGG
ATATATATAGGACACCTCTGTATGACCTTCGTATTGACCAAAAGATTTACGGAGAACTGTGGAAGACAGG
AATGTTTGAACGCATGTCTCTGCAGACAGATGAAGATGAACACAGTATTGAAATGCATTTGCCTTATACA
GCTAAAGCCATGGAAAGCCATAAGGATGAGTTTACCATTATTCCTGTACTGGTTGGAGCTCTGAGTGAGT
CAAAAGAACAGGAATTCGGAAAACTCTTCAGTAAATATCTAGCGGATCCTAGTAATCTCTTTGTGGTTTC
TTCTGATTTCTGCCATTGGGGTCAAAGGTTCCGTTACAGTTACTATGATGAATCCCAGGGGGAGATTTAT
AGATCCATTGAACATCTAGATAAAATGGGTATGAGTATTATAGAACAATTAGACCCTGTATCTTTTAGCA
ATTACTTGAAGAAATACCATAATACTATATGTGGAAGACATCCCATTGGGGTGTTATTAAATGCTATCAC
AGAGCTCCAGAAGAATGGAATGAATATGAGTTTTTCGTTTTTGAATTATGCCCAGTCGAGCCAGTGTAGA
AACTGGCAAGACAGTTCAGTGAGTTATGCAGCTGGAGCACTCACGGTCCACTGA

Translation (297 aa):
MSNRVVCREASHAGSWYTASGPQLNAQLEGWLSQVQSTKRPARAIIAPHAGYTYCGSCAAHAYKQVDPSI
TRRIFILGPSHHVPLSRCALSSVDIYRTPLYDLRIDQKIYGELWKTGMFERMSLQTDEDEHSIEMHLPYT
AKAMESHKDEFTIIPVLVGALSESKEQEFGKLFSKYLADPSNLFVVSSDFCHWGQRFRYSYYDESQGEIY
RSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQKNGMNMSFSFLNYAQSSQCR
NWQDSSVSYAAGALTVH


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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