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Report for CCDS12854.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
12854.1 |
Public |
Homo sapiens |
19 |
ZNF83 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:55769](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:12854.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:55769](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 19 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 12854.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000301096.8 |
ENSP00000301096.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000301096.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000301096.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000301096](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000301096](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000545872.1 |
ENSP00000440713.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000545872.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000440713.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000545872](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000440713](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000597597.1 |
ENSP00000472619.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000597597.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000472619.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000597597](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000472619](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001105549.2 |
NP_001099019.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001105549.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001099019.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001105549](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001099019](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001099019.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001105550.2 |
NP_001099020.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001105550.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001099020.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001105550](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001099020](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001099020.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001105551.2 |
NP_001099021.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001105551.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001099021.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001105551](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001099021](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001099021.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001105552.2 |
NP_001099022.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001105552.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001099022.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001105552](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001099022](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001099022.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277945.2 |
NP_001264874.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277945.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264874.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277945](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264874](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264874.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277946.2 |
NP_001264875.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277946.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264875.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277946](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264875](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264875.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277947.2 |
NP_001264876.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277947.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264876.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277947](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264876](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264876.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277948.2 |
NP_001264877.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277948.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264877.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277948](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264877](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264877.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277949.2 |
NP_001264878.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277949.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264878.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277949](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264878](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264878.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277951.2 |
NP_001264880.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277951.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264880.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277951](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264880](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264880.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001277952.2 |
NP_001264881.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001277952.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001264881.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001277952](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001264881](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001264881.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348015.2 |
NP_001334944.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348015.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001334944.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348015](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001334944](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001334944.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348016.2 |
NP_001334945.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348016.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001334945.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348016](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001334945](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001334945.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348017.2 |
NP_001334946.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348017.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001334946.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348017](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001334946](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001334946.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348018.2 |
NP_001334947.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348018.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001334947.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348018](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001334947](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001334947.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001348019.2 |
NP_001334948.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001348019.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001334948.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001348019](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001334948](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001334948.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_018300.4 |
NP_060770.3 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_018300.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_060770.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_018300](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_060770](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_060770.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 12854.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1551 nt): ATGCATGGGAGAAAGGATGATGCACAAAAGCAGCCTGTTAAAAATCAGCTTGGATTAAACCCGCAGTCAC ATCTACCAGAACTGCAGCTATTTCAAGCTGAAGGGAAAATATATAAATATGATCACATGGAAAAATCTGT CAACAGTAGTTCCTTAGTTTCCCCACCCCAACGTATTTCTTCTACTGTCAAAACCCACATTTCTCATACA TATGAATGTAATTTTGTGGATTCATTATTCACACAAAAAGAGAAAGCAAATATTGGGACAGAACACTACA AATGTAGTGAGCGTGGCAAGGCCTTTCATCAAGGCTTACATTTTACTATACATCAAATAATCCATACTAA AGAGACGCAATTTAAATGTGATATATGTGGCAAGATCTTCAATAAAAAATCAAACCTTGCAAGTCATCAA AGAATTCATACTGGAGAGAAGCCATATAAATGTAATGAATGTGGCAAGGTCTTCCATAATATGTCACACC TTGCACAGCATCGCAGGATTCATACTGGAGAGAAACCATATAAATGTAATGAATGTGGCAAGGTCTTTAA TCAAATTTCACACCTTGCACAACATCAAAGAATTCATACCGGAGAGAAACCTTATAAATGTAATGAATGT GGAAAGGTCTTCCATCAAATTTCACACCTTGCACAACATCGGACAATTCATACTGGAGAAAAACCTTACG AATGTAACAAATGTGGCAAGGTGTTCAGTCGCAATTCCTACCTTGTACAACATCTGATCATTCATACTGG AGAGAAACCTTACAGATGTAATGTATGTGGAAAGGTCTTCCATCATATTTCACACCTTGCACAACATCAG AGAATCCACACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCAGTCACAAGTCATCCC TAGTAAATCACTGGAGAATTCATACTGGAGAGAAACCTTACAAATGTAATGAGTGTGGCAAGGTCTTCAG TCACAAGTCATCCCTAGTAAATCACTGGAGAATCCACACTGGAGAGAAACCTTACAAATGTAATGAATGT GGCAAGGTCTTCAGTCGCAATTCATACCTTGCCCAACATCTGATAATTCATGCCGGTGAGAAACCTTATA AGTGTGATGAATGTGACAAAGCATTCAGTCAAAATTCACATCTTGTACAACATCACAGAATCCATACTGG AGAGAAACCTTACAAATGTGATGAATGTGGCAAAGTCTTCAGTCAAAATTCATACCTTGCATATCATTGG AGAATTCATACTGGAGAAAAAGCTTATAAATGTAATGAATGTGGGAAGGTCTTCGGTCTAAACTCATCCC TAGCACATCATCGGAAAATTCACACTGGAGAGAAACCTTTCAAATGTAATGAATGTGGCAAAGCTTTTAG TATGCGTTCAAGCCTCACTAATCATCATGCGATCCACACTGGAGAGAAACATTTCAAATGTAATGAATGT GGCAAACTCTTCCGCGACAATTCATATCTTGTACGTCATCAGAGATTTCATGCCGGAAAGAAATCTAACA CATGTAATTAA
Translation (516 aa): MHGRKDDAQKQPVKNQLGLNPQSHLPELQLFQAEGKIYKYDHMEKSVNSSSLVSPPQRISSTVKTHISHT YECNFVDSLFTQKEKANIGTEHYKCSERGKAFHQGLHFTIHQIIHTKETQFKCDICGKIFNKKSNLASHQ RIHTGEKPYKCNECGKVFHNMSHLAQHRRIHTGEKPYKCNECGKVFNQISHLAQHQRIHTGEKPYKCNEC GKVFHQISHLAQHRTIHTGEKPYECNKCGKVFSRNSYLVQHLIIHTGEKPYRCNVCGKVFHHISHLAQHQ RIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNEC GKVFSRNSYLAQHLIIHAGEKPYKCDECDKAFSQNSHLVQHHRIHTGEKPYKCDECGKVFSQNSYLAYHW RIHTGEKAYKCNECGKVFGLNSSLAHHRKIHTGEKPFKCNECGKAFSMRSSLTNHHAIHTGEKHFKCNEC GKLFRDNSYLVRHQRFHAGKKSNTCN
|