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Report for CCDS83477.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
83477.1 |
Public |
Homo sapiens |
X |
ARHGEF9 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:23229](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:83477.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:23229](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 83477.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000374872.4 |
ENSP00000364006.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000374872.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000364006.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000374872](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000364006](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000624210.3 |
ENSP00000485144.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000624210.3](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000485144.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000624210](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000485144](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000624538.2 |
ENSP00000485282.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000624538.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000485282.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000624538](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000485282](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000637723.2 |
ENSP00000489637.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000637723.2](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000489637.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000637723](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000489637](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000636392.1 |
ENSP00000489853.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000636392.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000489853.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000636392](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000489853](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000637178.1 |
ENSP00000489862.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000637178.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000489862.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000637178](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000489862](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000636048.1 |
ENSP00000490063.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000636048.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000490063.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000636048](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000490063](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000637520.1 |
ENSP00000490123.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000637520.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000490123.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000637520](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000490123](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000637417.1 |
ENSP00000490269.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000637417.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000490269.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000637417](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000490269](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000637557.1 |
ENSP00000490679.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000637557.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000490679.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000637557](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000490679](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000635967.1 |
ENSP00000490691.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000635967.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000490691.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000635967](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000490691](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001330495.2 |
NP_001317424.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001330495.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001317424.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001330495](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001317424](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001317424.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369033.1 |
NP_001355962.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369033.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001355962.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369033](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001355962](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001355962.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369034.1 |
NP_001355963.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369034.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001355963.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369034](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001355963](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001355963.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369035.1 |
NP_001355964.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369035.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001355964.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369035](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001355964](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001355964.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369036.1 |
NP_001355965.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369036.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001355965.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369036](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001355965](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001355965.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369037.1 |
NP_001355966.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369037.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001355966.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369037](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001355966](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001355966.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001369038.1 |
NP_001355967.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001369038.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001355967.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001369038](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001355967](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001355967.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 83477.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1488 nt): ATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGATT GGTGGTGGGGCCAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTCTGGGTGAACCA GGAGGATGAGGTGGAGGAGGGGCCCAGCGATGTGCAGAACGGACACCTGGACCCCAATTCAGACTGCCTC TGTCTGGGGCGGCCACTACAGAACCGGGACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTG AGCGTCACTACATCAAGCACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGA CATGTTCAGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGC TTTGTGAGAGACCTGGAGAAACAGTATAACAATGATGACCCCCACCTCAGCGAGATAGGACCCTGCTTCC TAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATTGTAACAACCACCTGGATGCTTGCATGGAGCT CTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTGAGGCCTGTCGCCTCTTGCAGCAGATGATT GACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTGGCTG AGCTCCTAAAGTATACTGCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCTTTGGCTGTCATGAG AAATGTGACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAGATTGCTCAGTGGCAG GCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATCTACACTGGGGAGA TGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGACCACCAGATGGT CCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGCCGCATTGACATGGATAAATAT GAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTC ACAACAAGGAGACTGAGGAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAG GGCTTTCAGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAG AAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTTC CTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGACGGCATCGCTCA GTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTCTGGCAAAACTTCAGCAGGTTA ACCCCCTTCAAAAAATGA
Translation (495 aa): MANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPASFVRLWVNQEDEVEEGPSDVQNGHLDPNSDCL CLGRPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMG FVRDLEKQYNNDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMI DIAIDGFLLTPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQ ASVLDWEGEDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKY EVVDIEDGRDDDFNVSMKNAFKLHNKETEEIHLFFAKKLEEKIRWLRAFREERKMVQEDEKIGFEISENQ KRQAAMTVRKVPKQKGVNSARSVPPSYPPPQDPLNHGQYLVPDGIAQSQVFEFTEPKRSQSPFWQNFSRL TPFKK
|