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Report for CCDS5663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5663.1 Public Homo sapiens 7 BUD31 24 110 108 CCDS HistoryNCBI Gene:8896Re-query CCDS DB by CCDS ID:5663.1Re-query CCDS DB by GeneID:8896See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5663.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000222969.10 ENSP00000222969.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000222969.10Link to Ensembl Protein Viewer:ENSP00000222969.5Re-query CCDS DB by Nucleotide ID:ENST00000222969Re-query CCDS DB by Protein ID:ENSP00000222969
Original member Current member EBI ENST00000403633.6 ENSP00000386023.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403633.6Link to Ensembl Protein Viewer:ENSP00000386023.2Re-query CCDS DB by Nucleotide ID:ENST00000403633Re-query CCDS DB by Protein ID:ENSP00000386023
Original member Current member NCBI NM_001370407.1 NP_001357336.1 Accepted alive Link to Nucleotide Sequence:NM_001370407.1Link to Protein Sequence:NP_001357336.1Re-query CCDS DB by Nucleotide ID:NM_001370407Re-query CCDS DB by Protein ID:NP_001357336Link to BLAST:NP_001357336.1
Original member Current member NCBI NM_001370410.1 NP_001357339.1 Accepted alive Link to Nucleotide Sequence:NM_001370410.1Link to Protein Sequence:NP_001357339.1Re-query CCDS DB by Nucleotide ID:NM_001370410Re-query CCDS DB by Protein ID:NP_001357339Link to BLAST:NP_001357339.1
Original member Current member NCBI NM_003910.4 NP_003901.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003910.4Link to Protein Sequence:NP_003901.2Re-query CCDS DB by Nucleotide ID:NM_003910Re-query CCDS DB by Protein ID:NP_003901Link to BLAST:NP_003901.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357336.1 144 P41223-1 144 100% 0 0
NP_001357339.1 144 P41223-1 144 100% 0 0
NP_003901.2 144 P41223-1 144 100% 0 0

Chromosomal Locations for CCDS 5663.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 99411093 99411186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99416138 99416260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99417429 99417595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 99419391 99419441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGCCTAAAGTCAAAAGAAGCCGGAAAGCACCCCCAGATGGCTGGGAGTTGATTGAGCCAACACTGGATG
AATTAGATCAAAAGATGAGAGAAGCTGAAACAGAACCGCATGAGGGAAAGAGGAAAGTGGAATCTCTGTG
GCCCATCTTCAGGATCCACCACCAGAAAACCCGCTACATCTTCGACCTCTTTTACAAGCGGAAAGCCATC
AGCAGAGAACTCTATGAATATTGTATTAAAGAAGGCTATGCAGACAAAAACCTGATTGCAAAATGGAAAA
AGCAAGGATATGAGAACTTGTGCTGCCTGCGGTGCATTCAGACACGGGACACCAACTTCGGGACGAACTG
CATCTGCCGCGTGCCCAAAAGCAAGCTGGAAGTGGGCCGCATCATCGAGTGCACACACTGTGGCTGTCGT
GGCTGCTCTGGCTGA

Translation (144 aa):
MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEPHEGKRKVESLWPIFRIHHQKTRYIFDLFYKRKAI
SRELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCR
GCSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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