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Report for CCDS9926.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9926.1 Public Homo sapiens 14 SERPINA12 24 110 108 CCDS HistoryNCBI Gene:145264Re-query CCDS DB by CCDS ID:9926.1Re-query CCDS DB by GeneID:145264See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9926.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000341228.2 ENSP00000342109.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000341228.2Link to Ensembl Protein Viewer:ENSP00000342109.2Re-query CCDS DB by Nucleotide ID:ENST00000341228Re-query CCDS DB by Protein ID:ENSP00000342109
Original member Current member EBI ENST00000556881.5 ENSP00000451738.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000556881.5Link to Ensembl Protein Viewer:ENSP00000451738.1Re-query CCDS DB by Nucleotide ID:ENST00000556881Re-query CCDS DB by Protein ID:ENSP00000451738
Original member Current member EBI ENST00000677451.1 ENSP00000503935.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000677451.1Link to Ensembl Protein Viewer:ENSP00000503935.1Re-query CCDS DB by Nucleotide ID:ENST00000677451Re-query CCDS DB by Protein ID:ENSP00000503935
Original member Current member NCBI NM_001304461.2 NP_001291390.1 Accepted alive Link to Nucleotide Sequence:NM_001304461.2Link to Protein Sequence:NP_001291390.1Re-query CCDS DB by Nucleotide ID:NM_001304461Re-query CCDS DB by Protein ID:NP_001291390Link to BLAST:NP_001291390.1
Original member Current member NCBI NM_001382267.1 NP_001369196.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001382267.1Link to Protein Sequence:NP_001369196.1Re-query CCDS DB by Nucleotide ID:NM_001382267Re-query CCDS DB by Protein ID:NP_001369196Link to BLAST:NP_001369196.1
Original member Current member NCBI NM_173850.4 NP_776249.1 Accepted alive Link to Nucleotide Sequence:NM_173850.4Link to Protein Sequence:NP_776249.1Re-query CCDS DB by Nucleotide ID:NM_173850Re-query CCDS DB by Protein ID:NP_776249Link to BLAST:NP_776249.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291390.1 414 Q8IW75 414 100% 0 0
NP_001369196.1 414 Q8IW75 414 100% 0 0
NP_776249.1 414 Q8IW75 414 100% 0 0

Chromosomal Locations for CCDS 9926.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 94487303 94487494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94489620 94489767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94496373 94496643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 94497764 94498397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1245 nt):
ATGAACCCCACACTAGGCCTGGCCATTTTTCTGGCTGTTCTCCTCACGGTGAAAGGTCTTCTAAAGCCGA
GCTTCTCACCAAGGAATTATAAAGCTTTGAGCGAGGTCCAAGGATGGAAGCAAAGGATGGCAGCCAAGGA
GCTTGCAAGGCAGAACATGGACTTAGGCTTTAAGCTGCTCAAGAAGCTGGCCTTTTACAACCCTGGCAGG
AACATCTTCCTATCCCCCTTGAGCATCTCTACAGCTTTCTCCATGCTGTGCCTGGGTGCCCAGGACAGCA
CCCTGGACGAGATCAAGCAGGGGTTCAACTTCAGAAAGATGCCAGAAAAAGATCTTCATGAGGGCTTCCA
TTACATCATCCACGAGCTGACCCAGAAGACCCAGGACCTCAAACTGAGCATTGGGAACACGCTGTTCATT
GACCAGAGGCTGCAGCCACAGCGTAAGTTTTTGGAAGATGCCAAGAACTTTTACAGTGCCGAAACCATCC
TTACCAACTTTCAGAATTTGGAAATGGCTCAGAAGCAGATCAATGACTTTATCAGTCAAAAAACCCATGG
GAAAATTAACAACCTGATCGAGAATATAGACCCCGGCACTGTGATGCTTCTTGCAAATTATATTTTCTTT
CGAGCCAGGTGGAAACATGAGTTTGATCCAAATGTAACTAAAGAGGAAGATTTCTTTCTGGAGAAAAACA
GTTCAGTCAAGGTGCCCATGATGTTCCGTAGTGGCATATACCAAGTTGGCTATGACGATAAGCTCTCTTG
CACCATCCTGGAAATACCCTACCAGAAAAATATCACAGCCATCTTCATCCTTCCTGATGAGGGCAAGCTG
AAGCACTTGGAGAAGGGATTGCAGGTGGACACTTTCTCCAGATGGAAAACATTACTGTCACGCAGGGTCG
TAGACGTGTCTGTACCCAGACTCCACATGACGGGCACCTTCGACCTGAAGAAGACTCTCTCCTACATAGG
TGTCTCCAAAATCTTTGAGGAACATGGTGATCTCACCAAGATCGCCCCTCATCGCAGCCTGAAAGTGGGC
GAGGCTGTGCACAAGGCTGAGCTGAAGATGGATGAGAGGGGTACGGAAGGGGCCGCTGGCACCGGAGCAC
AGACTCTGCCCATGGAGACACCACTCGTCGTCAAGATAGACAAACCCTATCTGCTGCTGATTTACAGCGA
GAAAATACCTTCCGTGCTCTTCCTGGGAAAGATTGTTAACCCTATTGGAAAATAA

Translation (414 aa):
MNPTLGLAIFLAVLLTVKGLLKPSFSPRNYKALSEVQGWKQRMAAKELARQNMDLGFKLLKKLAFYNPGR
NIFLSPLSISTAFSMLCLGAQDSTLDEIKQGFNFRKMPEKDLHEGFHYIIHELTQKTQDLKLSIGNTLFI
DQRLQPQRKFLEDAKNFYSAETILTNFQNLEMAQKQINDFISQKTHGKINNLIENIDPGTVMLLANYIFF
RARWKHEFDPNVTKEEDFFLEKNSSVKVPMMFRSGIYQVGYDDKLSCTILEIPYQKNITAIFILPDEGKL
KHLEKGLQVDTFSRWKTLLSRRVVDVSVPRLHMTGTFDLKKTLSYIGVSKIFEEHGDLTKIAPHRSLKVG
EAVHKAELKMDERGTEGAAGTGAQTLPMETPLVVKIDKPYLLLIYSEKIPSVLFLGKIVNPIGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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