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Report for CCDS13114.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
13114.1 |
Public |
Homo sapiens |
20 |
BTBD3 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:22903](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:13114.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:22903](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 13114.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000254977.7 |
ENSP00000254977.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000254977.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000254977.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000254977](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000254977](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000399006.6 |
ENSP00000381971.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000399006.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000381971.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000399006](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000381971](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000618296.4 |
ENSP00000477589.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000618296.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000477589.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000618296](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000477589](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000618918.4 |
ENSP00000483520.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000618918.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000483520.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000618918](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000483520](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001282550.3 |
NP_001269479.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001282550.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001269479.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001282550](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001269479](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001269479.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001282551.2 |
NP_001269480.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001282551.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001269480.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001282551](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001269480](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001269480.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001395003.1 |
NP_001381932.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001395003.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381932.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001395003](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381932](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381932.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001395007.1 |
NP_001381936.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001395007.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381936.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001395007](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381936](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381936.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001395009.1 |
NP_001381938.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001395009.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001381938.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001395009](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001381938](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001381938.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 13114.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1386 nt): ATGGCTGCTGATATATTCCCCCGTAAAAAGCCAGCCAACTCCAGCAGCACCAGCGTCCAGCAGTACCACC AGCAGAATCTCAGTAACAACAACCTTATCCCGGCCCCAAACTGGCAGGGTCTTTATCCCACCATTAGAGA GAGAAATGCGATGATGTTCAATAATGATTTGATGGCAGATGTACATTTTGTGGTTGGGCCACCAGGTGGG ACTCAACGGTTGCCAGGACACAAATATGTTTTAGCTGTTGGGAGCTCTGTGTTCCATGCGATGTTTTACG GAGAACTTGCAGAGGACAAAGATGAAATCCGTATACCAGATGTCGAACCTGCTGCTTTTCTCGCTATGCT GAAATATATCTATTGTGATGAAATTGACTTGGCTGCTGACACAGTGCTGGCCACACTTTATGCTGCCAAA AAGTACATTGTCCCTCACCTTGCCAGAGCCTGTGTTAATTTCCTGGAGACCAGCCTGAGTGCCAAGAATG CCTGTGTGCTCCTCTCCCAGAGCTGCCTGTTCGAGGAGCCAGACCTGACCCAGCGTTGCTGGGAGGTGAT TGATGCCCAGGCTGAGTTAGCTCTCAAGTCTGAGGGATTCTGCGATATTGACTTCCAGACACTAGAAAGT ATTCTCCGTAGGGAAACTCTGAATGCCAAAGAAATTGTGGTTTTTGAGGCAGCTCTCAACTGGGCTGAAG TAGAATGCCAACGACAAGATCTGGCGTTGAGCATTGAAAATAAACGCAAGGTTCTAGGAAAGGCACTTTA CTTGATCCGCATACCCACAATGGCCCTCGATGATTTTGCAAATGGTGCTGCACAGTCCGGGGTATTAACT CTCAATGAGACCAACGACATCTTCCTCTGGTATACTGCAGCCAAAAAGCCTGAGCTTCAGTTTGTGAGTA AAGCCCGTAAGGGCCTTGTCCCCCAGCGCTGTCACCGTTTCCAGTCGTGTGCCTATCGAAGCAACCAATG GCGCTATCGTGGTCGCTGTGACAGCATCCAGTTTGCAGTTGATAAAAGAGTGTTCATTGCTGGCTTTGGG CTGTATGGCTCCAGCTGTGGTTCTGCAGAATACAGTGCCAAGATTGAACTTAAGCGGCAGGGCGTTGTCC TGGGGCAGAACTTGAGCAAGTACTTCTCAGATGGGTCCAGCAATACCTTTCCCGTATGGTTTGAATACCC AGTGCAGATCGAGCCAGACACCTTCTACACAGCCAGTGTGATACTGGATGGCAATGAACTCAGCTACTTT GGACAAGAAGGCATGACAGAAGTTCAGTGTGGCAAAGTGACTGTCCAGTTTCAGTGCTCCTCAGATAGCA CCAATGGCACTGGGGTACAGGGAGGGCAGATCCCTGAACTTATATTCTATGCTTGA
Translation (461 aa): MAADIFPRKKPANSSSTSVQQYHQQNLSNNNLIPAPNWQGLYPTIRERNAMMFNNDLMADVHFVVGPPGG TQRLPGHKYVLAVGSSVFHAMFYGELAEDKDEIRIPDVEPAAFLAMLKYIYCDEIDLAADTVLATLYAAK KYIVPHLARACVNFLETSLSAKNACVLLSQSCLFEEPDLTQRCWEVIDAQAELALKSEGFCDIDFQTLES ILRRETLNAKEIVVFEAALNWAEVECQRQDLALSIENKRKVLGKALYLIRIPTMALDDFANGAAQSGVLT LNETNDIFLWYTAAKKPELQFVSKARKGLVPQRCHRFQSCAYRSNQWRYRGRCDSIQFAVDKRVFIAGFG LYGSSCGSAEYSAKIELKRQGVVLGQNLSKYFSDGSSNTFPVWFEYPVQIEPDTFYTASVILDGNELSYF GQEGMTEVQCGKVTVQFQCSSDSTNGTGVQGGQIPELIFYA
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