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Report for CCDS6813.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6813.1 Public Homo sapiens 9 PAPPA 24 110 108 CCDS HistoryNCBI Gene:5069Re-query CCDS DB by CCDS ID:6813.1Re-query CCDS DB by GeneID:5069See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6813.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328252.4 ENSP00000330658.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328252.4Link to Ensembl Protein Viewer:ENSP00000330658.3Re-query CCDS DB by Nucleotide ID:ENST00000328252Re-query CCDS DB by Protein ID:ENSP00000330658
Original member Current member NCBI NM_002581.5 NP_002572.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002581.5Link to Protein Sequence:NP_002572.2Re-query CCDS DB by Nucleotide ID:NM_002581Re-query CCDS DB by Protein ID:NP_002572Link to BLAST:NP_002572.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002572.2 1627 Q13219 1627 100% 0 0

Chromosomal Locations for CCDS 6813.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 116154173 116154587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116187154 116188216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116207456 116207601 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116211639 116211932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116219937 116220129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116227431 116227552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116235139 116235637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116265857 116265985 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116271325 116271416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116302757 116302950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116331244 116331357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116332333 116332468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116334861 116335074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116344543 116344711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116347026 116347209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116352706 116352916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116353622 116353793 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116362592 116362739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116367645 116367754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116377576 116377647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116382395 116382493 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 116396509 116396616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4884 nt):
ATGCGGCTCTGGAGTTGGGTGCTGCACCTGGGGCTGCTGAGCGCCGCGCTGGGCTGCGGGCTGGCCGAGC
GTCCCCGCCGGGCCCGGAGAGACCCGCGGGCCGGCCGACCCCCGCGCCCCGCCGCCGGCCCGGCCACCTG
CGCCACCCGGGCGGCCCGCGGCCGCCGCGCCTCGCCGCCGCCGCCGCCGCCGCCGGGCGGTGCCTGGGAA
GCCGTGCGCGTCCCCCGGCGGCGGCAGCAGCGGGAGGCGAGGGGCGCCACCGAGGAGCCGAGCCCGCCGA
GCCGGGCGCTCTATTTCAGCGGGCGAGGCGAGCAGCTGCGCCTCCGGGCCGACCTCGAGCTGCCCCGGGA
CGCGTTCACGCTGCAAGTGTGGCTGCGAGCGGAGGGGGGCCAGAGGTCTCCGGCAGTGATCACAGGGCTG
TATGACAAATGTTCTTATATCTCACGTGACCGAGGATGGGTCGTGGGCATTCACACCATCAGTGACCAAG
ACAACAAAGACCCACGCTACTTTTTCTCCTTGAAGACAGACCGAGCCCGGCAAGTGACCACCATCAATGC
CCACCGCAGCTACCTCCCAGGCCAGTGGGTATACCTAGCTGCCACCTATGATGGGCAGTTCATGAAGCTC
TATGTGAATGGTGCCCAGGTGGCCACCTCTGGGGAACAAGTGGGTGGCATATTCAGCCCACTGACCCAGA
AGTGCAAAGTGCTCATGTTAGGGGGCAGTGCCCTGAATCACAACTACCGGGGCTACATCGAGCACTTCAG
TCTGTGGAAGGTGGCCAGGACTCAGCGGGAGATACTGTCTGACATGGAAACCCATGGCGCCCACACTGCT
CTACCTCAGCTCCTCCTCCAGGAGAACTGGGACAATGTGAAGCATGCCTGGTCCCCCATGAAGGATGGCA
GCAGCCCCAAAGTGGAATTCAGCAATGCCCACGGCTTTCTGCTGGACACGAGTCTGGAGCCTCCTCTGTG
CGGACAGACATTGTGTGACAACACAGAGGTCATTGCCAGCTACAATCAGCTCTCAAGTTTCCGCCAGCCC
AAGGTGGTGCGCTACCGCGTGGTCAACCTCTATGAAGATGATCATAAGAACCCGACGGTGACGCGCGAGC
AGGTGGACTTCCAGCACCATCAGCTGGCTGAGGCCTTCAAGCAATACAACATCTCCTGGGAGCTGGACGT
GCTGGAGGTGAGCAACTCCTCCCTTCGCCGCCGCCTCATCCTGGCCAACTGTGACATCAGCAAGATTGGG
GATGAGAACTGTGACCCCGAGTGCAACCACACGCTGACGGGCCACGACGGCGGGGATTGCCGCCACCTGC
GCCACCCTGCCTTCGTGAAGAAGCAGCACAACGGGGTGTGTGACATGGACTGCAACTATGAACGGTTCAA
CTTTGATGGTGGAGAGTGCTGTGACCCTGAAATCACCAATGTCACTCAGACTTGCTTTGACCCCGACTCT
CCACACAGAGCCTACTTGGATGTTAATGAGCTGAAGAACATTCTTAAATTGGATGGATCAACACATCTCA
ATATTTTCTTTGCAAAATCCTCAGAGGAGGAGTTGGCAGGAGTAGCAACTTGGCCATGGGACAAGGAGGC
CCTGATGCACTTAGGTGGCATTGTCTTGAACCCATCTTTCTATGGCATGCCTGGGCACACCCACACCATG
ATCCATGAGATTGGTCACAGCCTGGGCCTCTATCACGTCTTCCGAGGCATCTCAGAAATCCAGTCCTGCA
GTGACCCCTGCATGGAGACAGAGCCCTCCTTCGAGACTGGAGACCTCTGCAATGATACCAACCCAGCCCC
TAAACACAAGTCCTGTGGTGACCCAGGGCCAGGAAATGACACCTGTGGCTTTCATAGCTTCTTCAACACT
CCTTACAACAACTTCATGAGCTATGCAGATGACGACTGTACGGACTCCTTCACGCCCAATCAAGTCGCCA
GAATGCACTGTTACCTGGACCTGGTCTACCAGGGCTGGCAGCCCTCCAGGAAACCAGCGCCTGTTGCCCT
CGCCCCCCAAGTTCTGGGCCACACAACGGACTCTGTGACACTGGAGTGGTTCCCACCTATAGATGGCCAT
TTCTTTGAAAGAGAATTGGGATCAGCATGTCATCTTTGCCTGGAAGGGAGAATCCTGGTGCAGTATGCTT
CCAACGCTTCCTCCCCAATGCCCTGCAGCCCATCAGGACACTGGAGCCCTCGTGAAGCAGAAGGTCATCC
TGATGTTGAACAGCCCTGTAAGTCCAGTGTCCGCACCTGGAGCCCAAATTCAGCTGTCAACCCACACACG
GTTCCTCCAGCCTGCCCTGAGCCTCAAGGCTGCTACCTCGAGCTGGAGTTCCTCTACCCCTTGGTCCCTG
AGTCTCTGACCATTTGGGTGACCTTTGTCTCCACTGACTGGGACTCTAGTGGAGCTGTCAATGACATCAA
ACTGTTGGCTGTCAGTGGGAAGAACATCTCCCTGGGTCCTCAGAATGTCTTCTGTGATGTCCCACTGACC
ATCAGACTCTGGGACGTGGGCGAGGAGGTGTATGGCATCCAAATCTACACGCTGGATGAGCACCTGGAGA
TCGATGCTGCCATGTTGACCTCCACTGCAGACACCCCACTCTGTCTACAGTGTAAGCCCCTGAAGTATAA
GGTGGTCCGGGACCCTCCTCTCCAGATGGATGTGGCCTCCATCCTACATCTCAATAGGAAATTCGTAGAC
ATGGATCTAAATCTTGGCAGTGTGTACCAGTATTGGGTCATAACTATTTCAGGAACTGAAGAGAGTGAGC
CATCACCTGCTGTCACATACATCCATGGAAGTGGGTACTGTGGCGATGGCATTATACAAAAAGACCAAGG
TGAACAATGCGACGACATGAATAAGATCAATGGTGATGGCTGCTCCCTTTTCTGCCGACAAGAAGTCTCC
TTCAATTGTATTGATGAACCCAGCCGGTGCTATTTCCATGATGGTGATGGGGTATGTGAGGAGTTTGAAC
AAAAAACCAGCATTAAGGACTGTGGTGTCTACACGCCCCAGGGATTCCTGGATCAGTGGGCATCCAATGC
TTCAGTATCTCATCAAGACCAGCAATGCCCAGGCTGGGTCATCATCGGACAGCCAGCAGCATCCCAGGTG
TGTCGAACCAAGGTGATAGATCTCAGTGAAGGCATTTCCCAGCATGCCTGGTACCCTTGCACCATCAGCT
ACCCATATTCCCAGCTGGCTCAGACCACTTTTTGGCTCCGGGCGTATTTTTCTCAACCAATGGTTGCCGC
AGCTGTCATTGTCCACCTGGTGACGGATGGGACATATTATGGGGACCAAAAGCAGGAGACCATCAGCGTG
CAGCTGCTTGATACCAAAGATCAGAGCCACGATCTAGGCCTCCATGTCCTGAGCTGCAGGAACAATCCCC
TGATTATCCCTGTGGTCCATGACCTCAGCCAGCCCTTCTACCACAGCCAGGCGGTACGTGTGAGCTTCAG
TTCGCCCCTGGTCGCCATCTCGGGGGTGGCCCTCCGTTCCTTCGACAACTTTGACCCCGTCACCCTGAGC
AGCTGCCAGAGAGGGGAGACCTACAGCCCTGCCGAGCAGAGCTGCGTGCACTTCGCATGTGAGAAAACTG
ACTGTCCAGAGCTGGCTGTGGAGAATGCTTCTCTCAATTGCTCCAGCAGCGACCGCTACCACGGTGCCCA
GTGTACTGTGAGCTGCCGGACAGGCTACGTGCTCCAGATACGGCGGGATGATGAGCTGATCAAGAGCCAG
ACGGGACCCAGCGTCACAGTGACCTGTACAGAGGGCAAGTGGAATAAGCAGGTGGCCTGTGAGCCAGTCG
ACTGCAGCATCCCAGATCACCATCAAGTCTATGCTGCCTCCTTCTCCTGCCCTGAGGGCACCACCTTTGG
CAGTCAATGTTCCTTCCAGTGCCGTCACCCTGCACAATTGAAAGGCAACAACAGCCTCCTGACCTGCATG
GAGGATGGGCTGTGGTCCTTCCCAGAGGCCCTGTGTGAGCTCATGTGCCTCGCTCCACCCCCTGTGCCCA
ATGCAGACCTCCAGACCGCCCGGTGCCGAGAGAATAAGCACAAGGTGGGCTCCTTCTGCAAATACAAATG
CAAGCCTGGATACCATGTGCCTGGATCCTCTCGGAAGTCAAAGAAACGGGCCTTCAAGACTCAGTGTACC
CAGGATGGCAGCTGGCAGGAGGGAGCTTGTGTTCCTGTGACCTGTGACCCACCTCCACCAAAATTCCATG
GGCTCTACCAGTGTACTAATGGCTTCCAGTTCAACAGTGAGTGTAGGATCAAGTGTGAAGACAGTGATGC
CTCCCAGGGACTTGGGAGCAATGTCATTCATTGCCGGAAAGATGGCACCTGGAACGGCTCCTTCCATGTC
TGCCAGGAGATGCAAGGCCAGTGCTCGGTTCCAAACGAGCTCAACAGCAACCTCAAACTGCAGTGCCCTG
ATGGCTATGCCATAGGGTCGGAGTGTGCCACCTCGTGCCTGGACCACAACAGCGAGTCCATCATCCTGCC
AATGAACGTGACCGTGCGTGACATCCCCCACTGGCTGAACCCCACACGGGTAGAGAGAGTTGTCTGCACT
GCTGGTCTCAAGTGGTATCCTCACCCTGCTCTGATTCACTGTGTCAAAGGCTGTGAGCCCTTCATGGGAG
ACAATTATTGTGATGCCATCAACAACCGAGCCTTTTGCAACTATGACGGTGGGGATTGCTGCACCTCCAC
AGTGAAGACCAAAAAGGTCACCCCATTCCCTATGTCCTGTGATCTACAAGGTGACTGTGCTTGTCGGGAC
CCCCAGGCCCAAGAACACAGCCGGAAAGACCTCCGGGGATACAGCCATGGCTAA

Translation (1627 aa):
MRLWSWVLHLGLLSAALGCGLAERPRRARRDPRAGRPPRPAAGPATCATRAARGRRASPPPPPPPGGAWE
AVRVPRRRQQREARGATEEPSPPSRALYFSGRGEQLRLRADLELPRDAFTLQVWLRAEGGQRSPAVITGL
YDKCSYISRDRGWVVGIHTISDQDNKDPRYFFSLKTDRARQVTTINAHRSYLPGQWVYLAATYDGQFMKL
YVNGAQVATSGEQVGGIFSPLTQKCKVLMLGGSALNHNYRGYIEHFSLWKVARTQREILSDMETHGAHTA
LPQLLLQENWDNVKHAWSPMKDGSSPKVEFSNAHGFLLDTSLEPPLCGQTLCDNTEVIASYNQLSSFRQP
KVVRYRVVNLYEDDHKNPTVTREQVDFQHHQLAEAFKQYNISWELDVLEVSNSSLRRRLILANCDISKIG
DENCDPECNHTLTGHDGGDCRHLRHPAFVKKQHNGVCDMDCNYERFNFDGGECCDPEITNVTQTCFDPDS
PHRAYLDVNELKNILKLDGSTHLNIFFAKSSEEELAGVATWPWDKEALMHLGGIVLNPSFYGMPGHTHTM
IHEIGHSLGLYHVFRGISEIQSCSDPCMETEPSFETGDLCNDTNPAPKHKSCGDPGPGNDTCGFHSFFNT
PYNNFMSYADDDCTDSFTPNQVARMHCYLDLVYQGWQPSRKPAPVALAPQVLGHTTDSVTLEWFPPIDGH
FFERELGSACHLCLEGRILVQYASNASSPMPCSPSGHWSPREAEGHPDVEQPCKSSVRTWSPNSAVNPHT
VPPACPEPQGCYLELEFLYPLVPESLTIWVTFVSTDWDSSGAVNDIKLLAVSGKNISLGPQNVFCDVPLT
IRLWDVGEEVYGIQIYTLDEHLEIDAAMLTSTADTPLCLQCKPLKYKVVRDPPLQMDVASILHLNRKFVD
MDLNLGSVYQYWVITISGTEESEPSPAVTYIHGSGYCGDGIIQKDQGEQCDDMNKINGDGCSLFCRQEVS
FNCIDEPSRCYFHDGDGVCEEFEQKTSIKDCGVYTPQGFLDQWASNASVSHQDQQCPGWVIIGQPAASQV
CRTKVIDLSEGISQHAWYPCTISYPYSQLAQTTFWLRAYFSQPMVAAAVIVHLVTDGTYYGDQKQETISV
QLLDTKDQSHDLGLHVLSCRNNPLIIPVVHDLSQPFYHSQAVRVSFSSPLVAISGVALRSFDNFDPVTLS
SCQRGETYSPAEQSCVHFACEKTDCPELAVENASLNCSSSDRYHGAQCTVSCRTGYVLQIRRDDELIKSQ
TGPSVTVTCTEGKWNKQVACEPVDCSIPDHHQVYAASFSCPEGTTFGSQCSFQCRHPAQLKGNNSLLTCM
EDGLWSFPEALCELMCLAPPPVPNADLQTARCRENKHKVGSFCKYKCKPGYHVPGSSRKSKKRAFKTQCT
QDGSWQEGACVPVTCDPPPPKFHGLYQCTNGFQFNSECRIKCEDSDASQGLGSNVIHCRKDGTWNGSFHV
CQEMQGQCSVPNELNSNLKLQCPDGYAIGSECATSCLDHNSESIILPMNVTVRDIPHWLNPTRVERVVCT
AGLKWYPHPALIHCVKGCEPFMGDNYCDAINNRAFCNYDGGDCCTSTVKTKKVTPFPMSCDLQGDCACRD
PQAQEHSRKDLRGYSHG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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