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Report for CCDS5957.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5957.1 Public Homo sapiens 8 MYOM2 24 110 108 CCDS HistoryNCBI Gene:9172Re-query CCDS DB by CCDS ID:5957.1Re-query CCDS DB by GeneID:9172See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5957.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262113.9 ENSP00000262113.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262113.9Link to Ensembl Protein Viewer:ENSP00000262113.4Re-query CCDS DB by Nucleotide ID:ENST00000262113Re-query CCDS DB by Protein ID:ENSP00000262113
Original member Current member NCBI NM_003970.4 NP_003961.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003970.4Link to Protein Sequence:NP_003961.3Re-query CCDS DB by Nucleotide ID:NM_003970Re-query CCDS DB by Protein ID:NP_003961Link to BLAST:NP_003961.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003961.3 1465 P54296 1465 100% 0 0

Chromosomal Locations for CCDS 5957.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 2050767 2050873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2052158 2052313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2057348 2057486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2057623 2057780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2059153 2059245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2069278 2069366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2069447 2069497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2072345 2072509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2073339 2073500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2076141 2076282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2078734 2078933 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2079560 2079613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2085263 2085390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2090008 2090191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2092346 2092520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2093970 2094091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2096247 2096434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2098857 2098983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2100876 2101054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2102667 2102781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2106242 2106398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2106491 2106597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2108786 2108830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2109395 2109531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2115960 2116104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2116216 2116275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2117885 2117952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2123252 2123365 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2123555 2123642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2124179 2124217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2129127 2129232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2140723 2140886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2141141 2141177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2142375 2142397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2143401 2143456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 2144664 2144981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4398 nt):
ATGTCCCTTGTGACTGTCCCCTTCTACCAGAAGAGACATAGGCACTTCGACCAGTCCTACCGTAATATTC
AA
ACACGGTACCTGCTGGACGAATATGCGTCAAAAAAGCGAGCTTCCACCCAGGCATCTTCCCAGAAGTC
C
TTGAGTCAGCGGTCGTCTTCACAGAGAGCCTCCAGCCAGACGTCCCTGGGAGGAACCATCTGCAGGGTC
TGT
GCGAAGCGAGTGAGCACGCAGGAAGATGAGGAGCAGGAGAACAGAAGCAGGTACCAGTCCCTGGTGG
CC
GCCTATGGTGAGGCCAAGCGACAGCGCTTCCTCAGCGAGCTGGCCCACTTGGAGGAGGATGTCCACCT
G
GCACGCTCCCAGGCCCGCGACAAGCTGGACAAATACGCCATTCAGCAGATGATGGAGGACAAGCTGGCC
TGG
GAGAGACACACATTTGAAGAGCGGATAAGCAGGGCTCCTGAGATCCTGGTGCGGCTGCGATCCCACA
CC
GTCTGGGAGAGGATGTCTGTGAAACTCTGCTTCACCGTGCAAGGATTTCCCACGCCCGTGGTGCAGTG
G
TACAAAGATGGCAGTCTGATTTGCCAGGCGGCTGAACCGGGAAAGTACAGGATTGAGAGCAACTATGGC
GTA
CACACACTGGAGATCAACAGGGCAGACTTTGACGACACTGCGACATACTCAGCAGTGGCCACCAATG
CC
CACGGACAAGTGTCCACCAACGCGGCGGTGGTGGTGAGAAGGTTCCGGGGAGACGAGGAACCATTCCG
T
TCGGTGGGACTCCCGATTGGATTGCCCCTGTCATCGATGATTCCGTACACGCACTTCGACGTCCAGTTT
TTG
GAGAAGTTTGGGGTCACCTTCAGGAGGGAAGGCGAGACGGTCACTCTCAAGTGCACCATGCTGGTGA
CG
CCGGACCTGAAGCGGGTGCAGCCGCGCGCCGAGTGGTACCGCGATGACGTGCTGTTGAAAGAGTCCAA
G
TGGACGAAGATGTTCTTTGGAGAAGGCCAGGCCTCCCTGTCCTTCAGCCACCTGCACAAGGACGACGAG
GGC
CTGTACACCCTGCGCATCGTGTCTCGGGGCGGCGTCAGCGACCACAGCGCCTTCCTGTTTGTCAGAG
AT
GCTGACCCGCTGGTCACAGGGGCCCCCGGTGCACCCATGGACTTGCAGTGCCACGACGCCAACCGGGA
C
TACGTCATCGTGACCTGGAAGCCGCCCAACACCACCACTGAGAGCCCCGTCATGGGCTATTTTGTGGAC
CG
A
TGTGAAGTAGGAACGAATAATTGGGTGCAGTGCAATGATGCACCGGTGAAAATCTGCAAATACCCGG
TC
ACAGGGCTTTTTGAAGGAAGGTCTTACATATTCCGAGTGAGGGCAGTGAACAGTGCGGGCATCAGCCG
A
CCCTCCAGGGTCTCTGATGCGGTGGCTGCACTTGACCCCTTGGACCTCAGAAGGTTACAAGCCGTTCAT
TTG
GAGGGAGAGAAGGAGATTGCCATTTATCAGGATGACCTTGAAGGTGACGCCCAGGTTCCAGGGCCTC
CC
ACCGGTGTGCACGCTTCCGAGATCAGCAGAAACTATGTCGTCCTCAGCTGGGAGCCACCCACTCCCCG
T
GGCAAGGACCCGCTCATGTACTTCATTGAGAAGTCCGTGGTGGGGAGCGGCAGCTGGCAGAGAGTCAAC
GCC
CAGACGGCTGTGAGATCCCCGAGATATGCCGTGTTTGACCTCATGGAAGGGAAGTCTTATGTGTTCC
GA
GTGCTGTCAGCAAACCGGCATGGCCTGAGCGAACCTTCGGAGATAACGTCCCCCATTCAGGCCCAGGA
T
GTGACCGTTGTCCCTTCTGCTCCGGGTCGGGTTCTTGCTTCCCGAAACACCAAGACGTCGGTGGTGGTG
CAG
TGGGACCGACCTAAGCATGAGGAGGACCTGCTGGGCTACTACGTGGACTGCTGTGTGGCCGGAACCA
AC
CTCTGGGAGCCCTGCAACCACAAGCCCATCGGATACAACAGGTTCGTGGTGCACGGCTTAACCACGGG
A
GAGCAGTACATCTTCCGAGTCAAGGCGGTCAATGCTGTGGGGATGAGTGAAAATTCCCAGGAATCAGAC
GTC
ATAAAAGTGCAGGCCGCACTCACCGTCCCGTCCCATCCTTATGGGATTACGCTCCTCAACTGTGACG
GC
CACTCCATGACCCTCGGCTGGAAGGTCCCGAAATTCAGTGGTGGCTCGCCCATCCTGGGCTACTACCT
G
GACAAGCGTGAAGTTCACCATAAAAACTGGCACGAGGTCAATTCCTCACCCAGCAAACCGACAATCCTA
ACG
GTGGACGGCTTGACGGAAGGCTCACTCTACGAGTTCAAAATCGCCGCCGTCAACCTGGCCGGCATCG
GG
GAGCCCTCAGATCCCAGTGAGCACTTCAAGTGTGAGGCCTGGACCATGCCGGAGCCCGGTCCTGCCTA
C
GACTTGACGTTCTGTGAGGTCAGGGACACGTCCTTGGTCATGCTGTGGAAGGCCCCTGTGTACTCCGGC
AGC
AGCCCTGTTTCTGGATATTTCGTGGACTTCAGGGAGGAGGATGCTGGAGAGTGGATCACTGTCAATC
AG
ACGACAACAGCCAGCCGTTATTTAAAGGTCTCTGACCTGCAGCAAGGTAAGACCTATGTCTTCAGGGT
C
CGGGCAGTCAATGCAAATGGCGTGGGGAAGCCCTCAGACACGTCGGAGCCTGTGCTGGTAGAGGCGAGA
CCA
GGCACCAAGGAAATCAGTGCTGGTGTCGATGAACAAGGCAACATCTATCTGGGCTTCGACTGCCAGG
AA
ATGACAGACGCGTCTCAGTTCACCTGGTGTAAATCCTACGAGGAGATTTCAGATGATGAGAGGTTTAA
A
ATTGAAACCGTGGGGGATCACTCCAAGCTGTACTTAAAGAATCCGGATAAGGAGGATTTAGGGACTTAC
TCC
GTGTCTGTAAGTGATACAGACGGAGTGTCCTCCAGTTTTGTTCTGGACCCAGAAGAGCTCGAGCGTT
TG
ATGGCATTGAGCAATGAAATAAAGAACCCCACAATTCCTCTGAAATCGGAATTAGCTTATGAGATTTT
T
GATAAGGGGCGGGTTCGCTTCTGGCTCCAGGCTGAGCACTTATCACCAGATGCCAGCTACCGATTTATT
ATT
AACGACAGAGAAGTCTCTGACAGCGAGATACACAGAATTAAATGTGACAAAGCTACTGGCATTATTG
AG
ATGGTGATGGATCGATTTAGTATTGAAAATGAGGGGACCTACACTGTGCAGATTCATGATGGGAAAGC
C
AAAAGTCAGTCTTCTCTAGTTCTTATTGGAGATGCATTCAAGACTGTGCTGGAAGAGGCTGAGTTTCAA
AGG
AAAGAATTTCTCAGGAAACAAGGCCCTCATTTTGCTGAGTACTTGCACTGGGATGTCACGGAAGAAT
GT
GAAGTTCGACTTGTTTGCAAGGTTGCAAACACCAAGAAAGAAACCGTTTTCAAATGGCTCAAGGATGA
T
GTTCTGTATGAAACGGAGACACTGCCTAACCTGGAGAGGGGAATCTGTGAGCTCCTCATCCCAAAGTTG
TCA
AAGAAGGACCACGGTGAATACAAGGCAACCTTGAAAGATGACAGAGGCCAAGATGTGTCCATCCTTG
AA
ATAGCTGGCAAAGTGTATGATGATATGATTTTGGCAATGAGTAGAGTCTGTGGGAAATCTGCTTCGCC
A
CTGAAGGTACTCTGCACCCCAGAAGGAATACGACTTCAGTGTTTCATGAAGTATTTTACAGACGAAATG
AAA
GTGAACTGGTGTCACAAAGATGCTAAGATCTCATCCAGTGAGCATATGAGAATCGGGGGGAGTGAAG
AG
ATGGCTTGGCTGCAGATATGTGAGCCGACTGAGAAGGATAAAGGAAAATACACTTTTGAGATTTTCGA
T
GGCAAAGACAACCATCAACGCTCCCTTGACCTGTCCGGACAAGCTTTTGATGAAGCATTTGCAGAATTC
CAG
CAATTCAAAGCTGCTGCTTTTGCAGAGAAGAATCGTGGCAGGTTGATCGGCGGCTTGCCTGACGTGG
TG
ACCATCATGGAAGGGAAGACCTTGAATCTGACCTGCACGGTGTTTGGAAACCCTGACCCCGAAGTGAT
T
TGGTTCAAGAACGACCAGGACATCCAGCTCAGCGAGCACTTCTCGGTGAAGGTGGAGCAGGCCAAGTAC
GTC
AGCATGACCATCAAAGGCGTGACCTCCGAGGACTCGGGCAAGTACAGCATCAACATCAAGAATAAGT
AT
GGCGGGGAGAAGATCGACGTGACAGTGAGCGTGTACAAACACGGGGAGAAGATCCCGGACATGGCCCC
G
CCCCAGCAAGCCAAGCCCAAGCTCATCCCCGCGTCTGCCTCAGCGGCAGGCCAGTGA


Translation (1465 aa):
MSLVTVPFYQKRHRHFDQSYRNIQTRYLLDEYASKKRASTQASSQKSLSQRSSSQRASSQTSLGGTICRV
C
AKRVSTQEDEEQENRS
RYQSLVAAYGEAKRQRFLSELAHLEEDVHLARSQARDKLDKYAIQQMMEDKLA
W
ERHTFEERISRAPEILVRLRSHTVWERMSVKLCFTVQGFPTPVVQ
WYKDGSLICQAAEPGKYRIESNYG
V
HTLEIN
RADFDDTATYSAVATNAHGQVSTNAAVVVRRFRGDEEPFRSVGLPIGLPLSSMIPYTHFDVQF
L
EKFGVTFRREGETVTLKCTMLVTPDLKRVQPRAEWYRD
DVLLKESKWTKMFFGEGQASLSFSHLHKDDE
G
LYTLRIVSRGGVSDHSAFLFVR
DADPLVTGAPGAPMDLQCHDANRDYVIVTWKPPNTTTESPVMGYFVD
R
CEVGTNNWVQCNDAPVKICKYPVTGLFEGRSYIFRVRAVNSAGISRPSRVSDAVAALDPLDLRRLQAVH
L
EGEKEIAIYQDDLE
GDAQVPGPPTGVHASEISRNYVVLSWEPPTPRGKDPLMYFIEKSVVGSGSWQRVN
A
QTAVRSPRYAVFDLMEGKSYVFRVLSANRHGLSEPSEITSPIQAQDVT
VVPSAPGRVLASRNTKTSVVV
Q
WDRPKHEEDLLGYYVDCCVAGTNLWEPCNHKPIGYN
RFVVHGLTTGEQYIFRVKAVNAVGMSENSQESD
V
IKVQAAL
TVPSHPYGITLLNCDGHSMTLGWKVPKFSGGSPILGYYLDKREVHHKNWHEVNSSPSKPTIL
T
VDGLTEGSLYEFKIAAVNLAGIGEPSDPSEHFKCEAWTMPEPGPAYDLTFCEVRDTSLVMLWKAPVYSG
S
SPVSGYFVDFREEDAGEWITVNQTTTASRYLK
VSDLQQGKTYVFRVRAVNANGVGKPSDTSEPVLVEAR
P
GTKEISAGVDEQGNIYLGFDCQEMTDASQFTWCKSYEEISDDERFKIETVGDHSKLYLKNPDKEDLGTY
S
VSVSDTDGVSSSFVLDPE
ELERLMALSNEIKNPTIPLKSELAYEIFDKGRVRFWLQAEHLSPDASYRFI
I
NDREVSDSE
IHRIKCDKATGIIEMVMDRFSIENEGTYTVQIHDGKAKSQSSLVLIGDAFKTVLEEAEFQ
R
KEFLRKQ
GPHFAEYLHWDVTEECEVRLVCKVANTKKETVFKWLKDDVLYETETLPNLERGICELLIPKL
S
KKDHGEYKATLKDDRGQDVSILEIAGK
VYDDMILAMSRVCGKSASPLKVLCTPEGIRLQCFMKYFTDEM
K
VNWCH
KDAKISSSEHMRIGGSEEMAWLQICEPTEKDKGKYTFEIFDGKDNHQRSLDLSGQAFDEAFAEF
Q
QF
KAAAFAEKNRGRLIGGLPDVVTIMEGKTLNLTCTVFGNPDPEVIWFKNDQDIQLSEHFSVKVEQAKY
V
SMTIKGVTSEDSGKYSINIKNKYGGEKIDVTVSVYKHGEKIPDMAPPQQAKPKLIPASASAAGQ




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser