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Report for CCDS35160.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35160.1 Public Homo sapiens 9 NTMT1 24 110 108 CCDS HistoryNCBI Gene:28989Re-query CCDS DB by CCDS ID:35160.1Re-query CCDS DB by GeneID:28989See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35160.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372480.1 ENSP00000361558.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372480.1Link to Ensembl Protein Viewer:ENSP00000361558.1Re-query CCDS DB by Nucleotide ID:ENST00000372480Re-query CCDS DB by Protein ID:ENSP00000361558
Original member Current member EBI ENST00000372483.9 ENSP00000361561.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372483.9Link to Ensembl Protein Viewer:ENSP00000361561.4Re-query CCDS DB by Nucleotide ID:ENST00000372483Re-query CCDS DB by Protein ID:ENSP00000361561
Original member Current member EBI ENST00000372486.5 ENSP00000361564.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372486.5Link to Ensembl Protein Viewer:ENSP00000361564.1Re-query CCDS DB by Nucleotide ID:ENST00000372486Re-query CCDS DB by Protein ID:ENSP00000361564
Original member Current member EBI ENST00000613644.4 ENSP00000478521.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000613644.4Link to Ensembl Protein Viewer:ENSP00000478521.1Re-query CCDS DB by Nucleotide ID:ENST00000613644Re-query CCDS DB by Protein ID:ENSP00000478521
Original member Current member EBI ENST00000611055.4 ENSP00000483489.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611055.4Link to Ensembl Protein Viewer:ENSP00000483489.1Re-query CCDS DB by Nucleotide ID:ENST00000611055Re-query CCDS DB by Protein ID:ENSP00000483489
Original member Current member NCBI NM_001286796.2 NP_001273725.1 Accepted alive Link to Nucleotide Sequence:NM_001286796.2Link to Protein Sequence:NP_001273725.1Re-query CCDS DB by Nucleotide ID:NM_001286796Re-query CCDS DB by Protein ID:NP_001273725Link to BLAST:NP_001273725.1
Original member Current member NCBI NM_001286797.2 NP_001273726.1 Accepted alive Link to Nucleotide Sequence:NM_001286797.2Link to Protein Sequence:NP_001273726.1Re-query CCDS DB by Nucleotide ID:NM_001286797Re-query CCDS DB by Protein ID:NP_001273726Link to BLAST:NP_001273726.1
Original member Current member NCBI NM_001286798.2 NP_001273727.1 Accepted alive Link to Nucleotide Sequence:NM_001286798.2Link to Protein Sequence:NP_001273727.1Re-query CCDS DB by Nucleotide ID:NM_001286798Re-query CCDS DB by Protein ID:NP_001273727Link to BLAST:NP_001273727.1
Original member Current member NCBI NM_001286799.2 NP_001273728.1 Accepted alive Link to Nucleotide Sequence:NM_001286799.2Link to Protein Sequence:NP_001273728.1Re-query CCDS DB by Nucleotide ID:NM_001286799Re-query CCDS DB by Protein ID:NP_001273728Link to BLAST:NP_001273728.1
Original member Current member NCBI NM_014064.4 NP_054783.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014064.4Link to Protein Sequence:NP_054783.2Re-query CCDS DB by Nucleotide ID:NM_014064Re-query CCDS DB by Protein ID:NP_054783Link to BLAST:NP_054783.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273725.1 223 Q9BV86-1 223 100% 0 0
NP_001273726.1 223 Q9BV86-1 223 100% 0 0
NP_001273727.1 223 Q9BV86-1 223 100% 0 0
NP_001273728.1 223 Q9BV86-1 223 100% 0 0
NP_054783.2 223 Q9BV86-1 223 100% 0 0

Chromosomal Locations for CCDS 35160.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 129632704 129632865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129634054 129634306 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 129635208 129635464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGACGAGCGAGGTGATAGAAGACGAGAAGCAATTCTATTCCAAGGCCAAGACCTACTGGAAACAAATCC
CACCCACGGTGGACGGCATGCTTGGGGGGTATGGCCACATCTCCAGCATCGACATCAACAGCTCCCGGAA
GTTTCTGCAGAGGTTTTTGAGGGAAGGCCCGAACAAGACAGGAACGTCCTGTGCCCTGGACTGTGGAGCT
GGCATTGGGAGGATCACCAAGCGGCTGCTCCTGCCGCTGTTCAGAGAGGTGGATATGGTCGACATAACGG
AGGACTTCCTGGTTCAAGCCAAGACCTACCTGGGGGAGGAGGGCAAGAGGGTGAGGAACTACTTCTGTTG
TGGGCTCCAGGACTTCACCCCGGAGCCGGACTCTTACGACGTGATCTGGATCCAGTGGGTGATAGGCCAC
CTCACCGATCAGCACCTGGCCGAGTTCCTGCGGCGCTGCAAGGGCAGCCTCCGCCCCAACGGCATCATCG
TCATCAAAGACAACATGGCCCAGGAGGGCGTGATTCTGGACGACGTGGACAGCAGCGTGTGCCGGGACCT
TGACGTGGTCCGCAGGATCATCTGCAGTGCAGGCCTCAGCCTCCTGGCCGAGGAGAGGCAGGAGAACCTC
CCCGATGAGATCTACCATGTCTATAGCTTTGCCCTGAGATGA

Translation (223 aa):
MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGA
GIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH
LTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENL
PDEIYHVYSFALR


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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