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Report for CCDS41765.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41765.1 Public Homo sapiens 12 ERGIC2 24 110 108 CCDS HistoryNCBI Gene:51290Re-query CCDS DB by CCDS ID:41765.1Re-query CCDS DB by GeneID:51290See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41765.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360150.9 ENSP00000353270.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360150.9Link to Ensembl Protein Viewer:ENSP00000353270.4Re-query CCDS DB by Nucleotide ID:ENST00000360150Re-query CCDS DB by Protein ID:ENSP00000353270
Original member Current member NCBI NM_016570.3 NP_057654.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016570.3Link to Protein Sequence:NP_057654.2Re-query CCDS DB by Nucleotide ID:NM_016570Re-query CCDS DB by Protein ID:NP_057654Link to BLAST:NP_057654.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057654.2 377 Q96RQ1 377 100% 0 0

Chromosomal Locations for CCDS 41765.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 29341156 29341218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29341734 29341816 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29343120 29343282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29345443 29345540 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29349079 29349177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29350013 29350068 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29356382 29356477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29357623 29357724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29361645 29361685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29366877 29366947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29368241 29368287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29370114 29370222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 29371528 29371633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1134 nt):
ATGAGGCGACTGAATCGGAAAAAAACTTTAAGTTTGGTAAAAGAGTTGGATGCCTTTCCGAAGGTTCCTG
AGAGCTATGTAGAGACTTCAGCCAGTGGAGGTACAGTTTCTCTAATAGCATTTACAACTATGGCTTTATT
AACCATAATGGAATTCTCAGTATATCAAGATACATGGATGAAGTATGAATACGAAGTAGACAAGGATTTT
TCTAGCAAATTAAGAATTAATATAGATATTACTGTTGCCATGAAGTGTCAATATGTTGGAGCGGATGTAT
TGGATTTAGCAGAAACAATGGTTGCATCTGCAGATGGTTTAGTTTATGAACCAACAGTATTTGATCTTTC
ACCACAGCAGAAAGAGTGGCAGAGGATGCTGCAGCTGATTCAGAGTAGGCTACAAGAAGAGCATTCACTT
CAAGATGTGATATTTAAAAGTGCTTTTAAAAGTACATCAACAGCTCTTCCACCAAGAGAAGATGATTCAT
CACAGTCTCCAAATGCATGCAGAATTCATGGCCATCTATATGTCAATAAAGTAGCAGGGAATTTTCACAT
AACAGTGGGCAAGGCAATTCCACATCCTCGTGGTCATGCACATTTGGCAGCACTTGTCAACCATGAATCT
TACAATTTTTCTCATAGAATAGATCATTTGTCTTTTGGAGAGCTTGTTCCAGCAATTATTAATCCTTTAG
ATGGAACTGAAAAAATTGCTATAGATCACAACCAGATGTTCCAATATTTTATTACAGTTGTGCCAACAAA
ACTACATACATATAAAATATCAGCAGACACCCATCAGTTTTCTGTGACAGAAAGGGAACGTATCATTAAC
CATGCTGCAGGCAGCCATGGAGTCTCTGGGATATTTATGAAATATGATCTCAGTTCTCTTATGGTGACAG
TTACTGAGGAGCACATGCCATTCTGGCAGTTTTTTGTAAGACTCTGTGGTATTGTTGGAGGAATCTTTTC
AACAACAGGCATGTTACATGGAATTGGAAAATTTATAGTTGAAATAATTTGCTGTCGTTTCAGACTTGGA
TCCTATAAACCTGTCAATTCTGTTCCTTTTGAGGATGGCCACACAGACAACCACTTACCTCTTTTAGAAA
ATAATACACATTAA

Translation (377 aa):
MRRLNRKKTLSLVKELDAFPKVPESYVETSASGGTVSLIAFTTMALLTIMEFSVYQDTWMKYEYEVDKDF
SSKLRINIDITVAMKCQYVGADVLDLAETMVASADGLVYEPTVFDLSPQQKEWQRMLQLIQSRLQEEHSL
QDVIFKSAFKSTSTALPPREDDSSQSPNACRIHGHLYVNKVAGNFHITVGKAIPHPRGHAHLAALVNHES
YNFSHRIDHLSFGELVPAIINPLDGTEKIAIDHNQMFQYFITVVPTKLHTYKISADTHQFSVTERERIIN
HAAGSHGVSGIFMKYDLSSLMVTVTEEHMPFWQFFVRLCGIVGGIFSTTGMLHGIGKFIVEIICCRFRLG
SYKPVNSVPFEDGHTDNHLPLLENNTH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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