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Report for CCDS10454.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10454.1 Public Homo sapiens 16 NOXO1 24 110 108 CCDS HistoryNCBI Gene:124056Re-query CCDS DB by CCDS ID:10454.1Re-query CCDS DB by GeneID:124056See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10454.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354249.8 ENSP00000346195.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354249.8Link to Ensembl Protein Viewer:ENSP00000346195.4Re-query CCDS DB by Nucleotide ID:ENST00000354249Re-query CCDS DB by Protein ID:ENSP00000346195
Original member Current member NCBI NM_144603.4 NP_653204.1 Accepted alive Link to Nucleotide Sequence:NM_144603.4Link to Protein Sequence:NP_653204.1Re-query CCDS DB by Nucleotide ID:NM_144603Re-query CCDS DB by Protein ID:NP_653204Link to BLAST:NP_653204.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653204.1 370 Q8NFA2-4 370 100% 0 0

Chromosomal Locations for CCDS 10454.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 1979052 1979349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1979425 1979542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1979790 1979903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1979997 1980181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1980367 1980544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1980656 1980728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1980939 1981019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 1981114 1981179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1113 nt):
ATGGCAGGCCCCCGATACCCAGTTTCAGTGCAAGGGGCAGCCCTGGTGCAGATCAAGAGGCTCCAAACGT
TTGCCTTCTCTGTGCGCTGGTCAGACGGCAGCGACACCTTCGTGCGCAGGAGTTGGGACGAATTCAGGCA
GCTCAAGACCCTCAAGGAGACCTTCCCGGTGGAGGCGGGCCTGCTGCGGAGATCTGACCGCGTTCTCCCA
AAGCTTCTCGATGCACCACTGTTGGGACGCGTGGGGCGCACGAGCCGCGGCCTGGCGCGCCTGCAGCTGT
TGGAAACCTATTCTCGGAGGCTGCTGGCGACTGCAGAGCGCGTGGCACGGAGCCCGACGATCACTGGCTT
CTTCGCACCGCAACCCCTGGACCTGGAGCCCGCGCTGCCACCCGGCAGCCGGGTGATCCTGCCCACCCCA
GAGGAGCAGCCTCTTTCTCGCGCTGCGGGCCGCCTCTCCATCCACAGTCTGGAGGCTCAGAGCCTGCGCT
GCCTGCAGCCCTTCTGTACCCAGGACACGCGGGATAGGCCTTTTCAGGCGCAGGCCCAGGAGAGCCTGGA
CGTGCTGCTGCGGCACCCCTCAGGCTGGTGGCTGGTGGAGAACGAAGACCGGCAGACCGCCTGGTTTCCA
GCGCCCTACCTGGAGGAGGCGGCCCCGGGCCAAGGCCGGGAGGGAGGCCCGTCCCTAGGGAGCAGCGGTC
CCCAGTTCTGTGCTTCCCGCGCCTACGAGAGCAGCCGCGCAGATGAGCTGTCCGTGCCCGCGGGGGCGCG
CGTGCGCGTGTTGGAAACGTCAGACCGCGGCTGGTGGCTATGCAGGTACGGCGACCGGGCGGGCCTACTC
CCCGCGGTGCTGCTGCGGCCGGAAGGGCTGGGCGCTCTCCTGAGCGGGACGGGGTTCCGTGGAGGAGACG
ACCCGGCGGGTGAGGCCCGGGGCTTCCCTGAACCCTCCCAGGCCACCGCCCCTCCCCCCACCGTGCCCAC
CCGACCTTCGCCGGGCGCCATCCAGAGCCGCTGCTGCACCGTCACACGCAGGGCCCTGGAGCGGCGCCCA
CGGCGCCAGGGCCGCCCTCGAGGGTGCGTGGACTCTGTGCCGCACCCCACGACGGAGCAGTGA

Translation (370 aa):
MAGPRYPVSVQGAALVQIKRLQTFAFSVRWSDGSDTFVRRSWDEFRQLKTLKETFPVEAGLLRRSDRVLP
KLLDAPLLGRVGRTSRGLARLQLLETYSRRLLATAERVARSPTITGFFAPQPLDLEPALPPGSRVILPTP
EEQPLSRAAGRLSIHSLEAQSLRCLQPFCTQDTRDRPFQAQAQESLDVLLRHPSGWWLVENEDRQTAWFP
APYLEEAAPGQGREGGPSLGSSGPQFCASRAYESSRADELSVPAGARVRVLETSDRGWWLCRYGDRAGLL
PAVLLRPEGLGALLSGTGFRGGDDPAGEARGFPEPSQATAPPPTVPTRPSPGAIQSRCCTVTRRALERRP
RRQGRPRGCVDSVPHPTTEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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