NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS19381.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19381.1 Public Mus musculus 5 Ugt2b34 23 108 98 CCDS HistoryNCBI Gene:100727Re-query CCDS DB by CCDS ID:19381.1Re-query CCDS DB by GeneID:100727See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19381.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000031181.15 ENSMUSP00000031181.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000031181.15Link to Ensembl Protein Viewer:ENSMUSP00000031181.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000031181Re-query CCDS DB by Protein ID:ENSMUSP00000031181
Original member NCBI NM_153598.2 NP_705826.1 Updated not alive Link to Nucleotide Sequence:NM_153598.2Link to Protein Sequence:NP_705826.1Re-query CCDS DB by Nucleotide ID:NM_153598Re-query CCDS DB by Protein ID:NP_705826
Current member NCBI NM_153598.3 NP_705826.1 Accepted alive Link to Nucleotide Sequence:NM_153598.3Link to Protein Sequence:NP_705826.1Re-query CCDS DB by Nucleotide ID:NM_153598Re-query CCDS DB by Protein ID:NP_705826Link to BLAST:NP_705826.1

Chromosomal Locations for CCDS 19381.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 86891202 86891481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86892743 86892962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86893733 86893820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86901154 86901285 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86904257 86904405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 86906191 86906920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1599 nt):
ATGCCTGTGAAAATGACAGCAGCCCTGCTCCTGCTCCTGCTCCAGCTGAGTGGCTTCTTTGGATCTGGGA
CTGGTGGGAAGGTGCTGGTGTGGCCAATGGAGTTCAGCCATTGGCTCAACTTGAAGACAATCCTAGACGA
GCTTCTGAAGAAGGGTCATGAAGTGATGGTTCTGAGACCTTCAGCATCCTTATCTTATGAGGTTGACAAC
ACATCTGCTATTGAATTCGAGACTTATCCTACATCATACTCCTTATCTGAGTTAGAGGAAATTTTCTGGG
AATCACTCAAGAAATATATTTATGAGCTGCCAAAGCAGTCATTTTGGGGATACTTCTTAATGTTGCAAGA
AATGGTTTGGGTAGATTCAAAATATTTTGAAAGTCTCTGTAAAGATGTAGTTTTTAACAAAGAACTCATG
ACAAAGCTACAAAAATCAAGGTTTGATGTGATCCTGGCAGATCCCTTCATACCCTGCGGTGATCTGCTGG
CTGAGGTTCTCAAGATCCCCCTTGTGTACAGTCTCCGCTTCTTTCCTGGCTCCACTTATGAGAAGTACAG
TGGGGGACTCCCACTGCCTCCTTCCTATGTGCCTGTTGTTATGTCAGAATTGAGTGACAGGATGACTTTC
ATGGAGAGGGTGAGAAATGTCATCTATATGCTGTGTTTTGACTTTTGGTTCCAAACATTTAATGAGAAGA
ACTGGAATCAGCTTTATACTGAAGTATTAGGAAGACCCACGACACTCTCAGAGACTATGGCCAAAGCAGA
CATATGGCTCATTAGGACCTACTGGGATTTAGAATTTCCTCATCCTGTCTTACCAAATTTTGATTTTATT
GGTGGCCTCCACTGCAGACCTGCCAAGCCCCTGCCTAAGGAAATAGAAGACTTTGTCCAGTCATCTGGAG
AACATGGTGTTGTGGTGTTTTCCCTGGGGTCCATGGTGGGTAGCATAACAGAAGAAAGAGCCAATGTGAT
TGCAGCAGGCCTTGCTCAGATTCCACAGAAGGTTCTGTGGAGATTTGAGGGCAAGAAGCCAGAGACATTG
GGCTCCAACACTCGTCTGTACAAATGGATCCCCCAGAATGACCTTCTAGGTCATTCCAAAACCAGAGCGT
TTATAACTCATGGTGGCACCAATGGCATCTATGAGGCGATCTACCATGGGATTCCAGTGGTTGGCATTCC
TTTGTTTGGAGACCAATATGACAATATTGTGCACTTGAAGGCCAAAGGAGCAGCTGTTAGACTGGACTTT
CTCACAATGTCTAGTACAGATTTGCACACTGCACTGAAGACAGTCACTAATGACCCTTCCTATAAGGAGA
ATGCCATGCGGTTATCAAGAATTCACCATGATCAGCCAGTGAAGCCCCTGGACCGAGCAGTCTTCTGGAT
TGAGTTTGTCATGCGTCACAAAGGAGCCAAGCATCTTCGTGTGGCAGCCCATGACCTCAGCTGGGTCCAA
TACCACTCTCTGGATGTGCTTGGGTTCCTGCTGGCCTGTGTGCTGACTGTGATGTTCATCCTCAAAAAGT
GTTGCCTCTTTTGTTGCCAGAAGTTGACTAAAGCTGGAAGGAAGAAGAAAGGGGAGTAG

Translation (532 aa):
MPVKMTAALLLLLLQLSGFFGSGTGGKVLVWPMEFSHWLNLKTILDELLKKGHEVMVLRPSASLSYEVDN
TSAIEFETYPTSYSLSELEEIFWESLKKYIYELPKQSFWGYFLMLQEMVWVDSKYFESLCKDVVFNKELM
TKLQKSRFDVILADPFIPCGDLLAEVLKIPLVYSLRFFPGSTYEKYSGGLPLPPSYVPVVMSELSDRMTF
MERVRNVIYMLCFDFWFQTFNEKNWNQLYTEVLGRPTTLSETMAKADIWLIRTYWDLEFPHPVLPNFDFI
GGLHCRPAKPLPKEIEDFVQSSGEHGVVVFSLGSMVGSITEERANVIAAGLAQIPQKVLWRFEGKKPETL
GSNTRLYKWIPQNDLLGHSKTRAFITHGGTNGIYEAIYHGIPVVGIPLFGDQYDNIVHLKAKGAAVRLDF
LTMSSTDLHTALKTVTNDPSYKENAMRLSRIHHDQPVKPLDRAVFWIEFVMRHKGAKHLRVAAHDLSWVQ
YHSLDVLGFLLACVLTVMFILKKCCLFCCQKLTKAGRKKKGE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH