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Report for CCDS59180.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59180.1 Public Homo sapiens XY IL9R 24 110 108 CCDS HistoryNCBI Gene:3581Re-query CCDS DB by CCDS ID:59180.1Re-query CCDS DB by GeneID:3581See the combined annotation on chromosome X in Sequence ViewerSee the combined annotation on chromosome Y in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59180.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369423.7 ENSP00000358431.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369423.7Link to Ensembl Protein Viewer:ENSP00000358431.2Re-query CCDS DB by Nucleotide ID:ENST00000369423Re-query CCDS DB by Protein ID:ENSP00000358431
Original member Current member NCBI NM_176786.2 NP_789743.2 Accepted alive Link to Nucleotide Sequence:NM_176786.2Link to Protein Sequence:NP_789743.2Re-query CCDS DB by Nucleotide ID:NM_176786Re-query CCDS DB by Protein ID:NP_789743Link to BLAST:NP_789743.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_789743.2 342 Q01113-3 342 100% 0 0

Chromosomal Locations for CCDS 59180.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11) On '+' strand of Chromosome Y (NC_000024.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome YSee the combined annotation on chromosome Y in Sequence Viewer

Chromosome Start Stop Links
X 155997744 155997787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156001408 156001508 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156002882 156003019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156003449 156003560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156003684 156003855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156004449 156004565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156005278 156005479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156006083 156006188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 156009816 156009852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

Chromosome Start Stop Links
Y 57184264 57184307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57187928 57188028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57189402 57189539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57189969 57190080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57190204 57190375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57190969 57191085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57191798 57191999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57192603 57192708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y
Y 57196336 57196372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome YLink to Ensembl Genome Browser on chromosome Y

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1029 nt):
ATGCCTCAGACTTGTGATGGGACTGGGCAGATGCATCTGGGAAGTAACTGCTGCAAGAACGGACAGACAC
TGCTGCAGAGAACTTGCCACGGTGTTTCATGCTGTGGCTGGTGGTTCCAGGCTGCACGCTCCATTCTAGG
AAAGGGGCCCTCAGCCCAGTCCCTTGCAGGCTGGACCTTGGAGAGTGAGGCCCTGAGGCGAGACATGGGC
ACCTGGCTCCTGGCCTGCATCTGCATCTGCACCTGTGTCTGCTTGGGAGTCTCTGTCACAGGGGAAGGAC
AAGGGCCAAGGTCTAGAACCTTCACCTGCCTCACCAACAACATTCTCAGGATCGATTGCCACTGGTCTGC
CCCAGAGCTGGGACAGGGCTCCAGCCCCTGGCTCCTCTTCACCAGGCTCCTGGCGGCACACATAAGTGCA
TCTTGCGGGGCAGTGAGTGCACCGTCGTGCTGCCACCTGAGGCAGTGCTCGTGCCATCTGACAATTTCAC
CATCACTTTCCACCACTGCATGTCTGGGAGGGAGCAGGTCAGCCTGGTGGACCCGGAGTACCTGCCCCGG
AGACACGAGCAACATCAGTTCTGGCCACTGCATCCTGACCTGGAGCATCAGTCCTGCCTTGGAGCCAATG
ACCACACTTCTCAGCTATGAGCTGGCCTTCAAGAAGCAGGAAGAGGCCTGGGAGCAGGCCCAGCACAGGG
ATCACATTGTCGGGGTGACCTGGCTTATACTTGAAGCCTTTGAGCTGGACCCTGGCTTTATCCATGAGGC
CAGGCTGCGTGTCCAGATGGCCACACTGGAGGATGATGTGGTAGAGGAGGAGCGTTATACAGGCCAGTGG
AGTGAGTGGAGCCAGCCTGTGTGCTTCCAGGCTCCCCAGAGACAAGGCCCTCTGATCCCACCCTGGGGGT
GGCCAGGCAACACCCTTGTTGCTGTGTCCATCTTTCTCCTGCTGACTGGCCCGACCTACCTCCTGTTCAA
GCTGTCGCCCAGACTTGGATGGGGGCCCACGGGGCCGGTGTGCTGTTGA

Translation (342 aa):
MPQTCDGTGQMHLGSNCCKNGQTLLQRTCHGVSCCGWWFQAARSILGKGPSAQSLAGWTLESEALRRDMG
TWLLACICICTCVCLGVSVTGEGQGPRSRTFTCLTNNILRIDCHWSAPELGQGSSPWLLFTRLLAAHISA
SCGAVSAPSCCHLRQCSCHLTISPSLSTTACLGGSRSAWWTRSTCPGDTSNISSGHCILTWSISPALEPM
TTLLSYELAFKKQEEAWEQAQHRDHIVGVTWLILEAFELDPGFIHEARLRVQMATLEDDVVEEERYTGQW
SEWSQPVCFQAPQRQGPLIPPWGWPGNTLVAVSIFLLLTGPTYLLFKLSPRLGWGPTGPVCC


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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