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Report for CCDS37160.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37160.1 Public Mus musculus 15 Cyp2d12 23 108 98 CCDS HistoryNCBI Gene:380997Re-query CCDS DB by CCDS ID:37160.1Re-query CCDS DB by GeneID:380997See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37160.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000068861.7 ENSMUSP00000071064.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000068861.7Link to Ensembl Protein Viewer:ENSMUSP00000071064.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000068861Re-query CCDS DB by Protein ID:ENSMUSP00000071064
Original member Current member NCBI NM_201360.2 NP_958748.1 Accepted alive Link to Nucleotide Sequence:NM_201360.2Link to Protein Sequence:NP_958748.1Re-query CCDS DB by Nucleotide ID:NM_201360Re-query CCDS DB by Protein ID:NP_958748Link to BLAST:NP_958748.1

Chromosomal Locations for CCDS 37160.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 82555147 82555335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82556201 82556372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82556644 82556796 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82556876 82557036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82557658 82557834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82558018 82558159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82558352 82558539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82558921 82559062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 82559163 82559353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1515 nt):
ATGGAGCTGCTGACTGGGACTGACCTGTGGTCTGTGGCCATATTCACAGTCATCTTCATATTACTGGTGG
ACCTGATGCACCGGCGCCAGAGCTGGACTTCTTGCTACCCACCAGGCCCTGTGCCATGGCCTGTGCTGGG
TAACCTGCTGCAGGTAGACCTAAATAATATGCCATACAGCTTGTACAAGCTTCAAAACCGCTATGGTGAC
GTGTTTAGCCTACAGATGGCCTGGAAGCCTATGGTTGTGATCAACAGAATGAAGGCAATGAAGGAAGTGC
TGTTGACCTGTGGAGAGGACACTGCTGACCGCCCTCCAGTGCCCATCTTTGAGCATCTTGGTTTCAAGCC
CAGATCCCAAGGTATGATCTTTGCACCCTATGGACCTGAGTGGCGAGAGCAGAGGCGATTCTCTTTGTCT
TCTCTGCGCAATTTTGGCCTGGGCAGGAAATCTCTGGAGGAGTGGGTGATCAAGGAGGCCGGCCACCTCT
GTGATGCCTTCACTACTCAGGCTGGGCAGTACATCAATCCCAACACCATGCTGAAAAAAGCTACGTGCAA
TGTGATTGCATCTCTCATTTTTGCCCGTCGCTTTGAATATGAAGACCCTTACCTCATCAGGATGCTGAAA
GTACTGGAAGATAGTTTGACAGAACTCTCTGGATTAATTCCTGAGGTTATTAACACATTCCCGATACTCC
TGCACATCCCAAGGCTGGCTGACAAGTTCCTGCAAAGTCAGAAGTCCTTCATCGCCATAGTGGATAACCT
GTTGACTGAAAACAGGACCACTTGGGACCCTGCCCAGTCACCCCGAAATTTGACTGATGCCTTCCTGGCA
GAGATAGAGAAGGCCAAGGGAAATCCTGAGAGCAGCTTCAATGATGAGAACCTGCGCATGGTGGTAATAG
ACCTGTTCACTGCAGGGATTCTGACCACCTCAACCACACTGTCCTGGGCCCTGCTGCTCATGATCCTGCA
TCCAGATGTGCAGCGCAGAGTCCAACAAGAAATCGATGAGGTCATAGGGCAGGTGAGGCATCCAGAGATG
GCAGACCAGGCCCACATGCCCTACACCAATGCTGTCATTCATGAGGTGCAGCGCTTTGGGGACATTGTTC
CACTGCATTTGCCACGCATCACAAGTCGTGACATTGAAGTGCAGGACTTCCTCATCCCCAAGGGGACGAT
CCTCCTCCCCAACATGTCCTCTGTGCATATGGATGACACTGTCTGGGAGAAGCCCCTCCGCTTCCATCCT
GAACACTTCCTGGATGCCCAGGGCCACTTTGTGAAGCATGAGGCCTTTATAACATTTTCAGCAGGCCGCA
GATCATGCCTGGGGGAGCCCCTGGCCCGAATGGAGCTCTTCCTCTTCTTCACCTGCCTCCTGCAGCGCTT
TAGCTTCTCAGTGCCTGATGGACAGCCCCAGCCCAGTGACCATAGAGTCTTTTCTATTATGGTTGCCCCC
TCCCCCTACCAGCTCTGTGCTGTGATACGTGAGCAAGGACACTAA

Translation (504 aa):
MELLTGTDLWSVAIFTVIFILLVDLMHRRQSWTSCYPPGPVPWPVLGNLLQVDLNNMPYSLYKLQNRYGD
VFSLQMAWKPMVVINRMKAMKEVLLTCGEDTADRPPVPIFEHLGFKPRSQGMIFAPYGPEWREQRRFSLS
SLRNFGLGRKSLEEWVIKEAGHLCDAFTTQAGQYINPNTMLKKATCNVIASLIFARRFEYEDPYLIRMLK
VLEDSLTELSGLIPEVINTFPILLHIPRLADKFLQSQKSFIAIVDNLLTENRTTWDPAQSPRNLTDAFLA
EIEKAKGNPESSFNDENLRMVVIDLFTAGILTTSTTLSWALLLMILHPDVQRRVQQEIDEVIGQVRHPEM
ADQAHMPYTNAVIHEVQRFGDIVPLHLPRITSRDIEVQDFLIPKGTILLPNMSSVHMDDTVWEKPLRFHP
EHFLDAQGHFVKHEAFITFSAGRRSCLGEPLARMELFLFFTCLLQRFSFSVPDGQPQPSDHRVFSIMVAP
SPYQLCAVIREQGH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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