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Report for CCDS57985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57985.1 Public Homo sapiens 1 FAM229A 24 110 108 CCDS HistoryNCBI Gene:100128071Re-query CCDS DB by CCDS ID:57985.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57985.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000432622.2 ENSP00000455971.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000432622.2Link to Ensembl Protein Viewer:ENSP00000455971.1Re-query CCDS DB by Nucleotide ID:ENST00000432622Re-query CCDS DB by Protein ID:ENSP00000455971
Original member Current member NCBI NM_001167676.2 NP_001161148.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001167676.2Link to Protein Sequence:NP_001161148.1Re-query CCDS DB by Nucleotide ID:NM_001167676Re-query CCDS DB by Protein ID:NP_001161148Link to BLAST:NP_001161148.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001161148.1 127 H3BQW9 127 100% 0 0

Chromosomal Locations for CCDS 57985.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 32361433 32361535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32361730 32361876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 32361958 32362091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (384 nt):
ATGCTGCCCTCCTCGACGCCCGGGCCCGGGCACGCCACAGAGACCTGCCCGGCTCCGCCTGGACCGGAGC
GTTCTCCCGCGGCCAGGGCTCCGGCAGCTGCTTCTAGCCTGGGACCGGTCTCAACCGCCGGGAGAGCGCC
CCGGGGCTTGGACATGAGCGCCCAGGAGCCCCCGCAGGGTCGGAGATTCCCCATTGAGGCCGGAGACTCC
CGTGGCCTTGCCGCCGCCCCCGAGTCCCAGGACAGCCCGGAGGCGGTAGCGACGGAGCACAACCCGGTCA
GGCCGCTTCGTCGCTGCCCTGGATGCCACTGCCTGACGCTGCTGCACGTGCCCATCGACGTCTACCTCGC
CATGGGCGGGAGCCCCCGGGCCCGCGCCACGTGA

Translation (127 aa):
MLPSSTPGPGHATETCPAPPGPERSPAARAPAAASSLGPVSTAGRAPRGLDMSAQEPPQGRRFPIEAGDS
RGLAAAPESQDSPEAVATEHNPVRPLRRCPGCHCLTLLHVPIDVYLAMGGSPRARAT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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