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Report for CCDS46476.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46476.1 Public Homo sapiens 2 NEMP2 24 110 108 CCDS HistoryNCBI Gene:100131211Re-query CCDS DB by CCDS ID:46476.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46476.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409150.8 ENSP00000386292.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409150.8Link to Ensembl Protein Viewer:ENSP00000386292.3Re-query CCDS DB by Nucleotide ID:ENST00000409150Re-query CCDS DB by Protein ID:ENSP00000386292
Original member Current member NCBI NM_001142645.2 NP_001136117.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001142645.2Link to Protein Sequence:NP_001136117.1Re-query CCDS DB by Nucleotide ID:NM_001142645Re-query CCDS DB by Protein ID:NP_001136117Link to BLAST:NP_001136117.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136117.1 417 A6NFY4-1 417 100% 0 0

Chromosomal Locations for CCDS 46476.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 190509189 190509312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190510361 190510537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190514453 190514678 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190516270 190516384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190517520 190517613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190518736 190518808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190518952 190519183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190525263 190525378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 190534559 190534655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1254 nt):
ATGGGGCCGCGCCAAGGGCGGTGGTGGCTGCTGCTCTGGCTGCCGCCCCTGGCCACACTGCCCGTGCGCG
GGGAGGCGGCGGCGGCAGCGTTATCAGTTCGTAGGTGTAAAGCTTTGAAGGAAAAAGATTTAATTAGAAC
GTCTGAGTCAGACTGTTACTGCTACAATCAAAATTCCCAAGTGGAGTGGAAATACATATGGTCAACTATG
CAGGTGAAAATTACCAGTCCAGGCCTGTTCAGAATTGTATATATCGCAGAAAGACATAATTGCCAATATC
CAGAAAACATTCTATCTTTTATCAAATGTGTGATTCATAACTTTTGGATACCAAAGGAATCTAACGAAAT
AACCATAATCATCAATCCATACAGGGAGACTGTGTGCTTCTCTGTGGAGCCTGTCAAGAAGATATTTAAC
TATATGATACATGTGAATCGAAACATCATGGATTTCAAACTCTTCCTTGTGTTTGTGGCAGGAGTTTTTC
TTTTCTTTTATGCAAGGACCCTGAGTCAAAGCCCTACTTTCTATTACTCCTCGGGAACTGTGCTAGGTGT
TCTAATGACATTAGTCTTTGTCTTGCTGTTGGTGAAAAGATTCATTCCGAAGTATAGCACCTTTTGGGCT
CTAATGGTTGGTTGTTGGTTTGCCTCAGTTTATATTGTATGCCAGTTGATGGAAGATCTGAAGTGGCTGT
GGTATGAAAACAGGATATATGTATTAGGCTATGTCTTGATAGTTGGATTTTTCAGCTTTGTTGTTTGTTA
CAAGCATGGGCCCCTTGCAGACGACAGGAGCAGAAGTCTTCTGATGTGGATGCTGCGACTCCTCTCCCTG
GTTCTGGTCTATGCTGGTGTGGCCGTGCCTCAGTTTGCCTATGCAGCCATAATCCTCCTCATGTCCTCCT
GGAGTCTGCACTACCCACTGAGAGCATGCAGTTATATGAGGTGGAAAATGGAGCAGTGGTTTACATCAAA
AGAGCTGGTGGTGAAATATCTTACGGAAGACGAGTACAGGGAGCAAGCTGATGCTGAAACGAACAGTGCT
CTGGAGGAGCTACGCCGGGCCTGCCGAAAACCCGACTTTCCCTCATGGCTGGTCGTCTCCAGACTCCACA
CTCCTAGCAAATTTGCAGACTTTGTTCTTGGAGGAAGCCACTTGTCACCTGAAGAAATCAGTCTGCATGA
AGAGCAGTATGGCCTTGGGGGTGCCTTCTTGGAAGAGCAGCTCTTTAACCCGAGTACTGCCTGA

Translation (417 aa):
MGPRQGRWWLLLWLPPLATLPVRGEAAAAALSVRRCKALKEKDLIRTSESDCYCYNQNSQVEWKYIWSTM
QVKITSPGLFRIVYIAERHNCQYPENILSFIKCVIHNFWIPKESNEITIIINPYRETVCFSVEPVKKIFN
YMIHVNRNIMDFKLFLVFVAGVFLFFYARTLSQSPTFYYSSGTVLGVLMTLVFVLLLVKRFIPKYSTFWA
LMVGCWFASVYIVCQLMEDLKWLWYENRIYVLGYVLIVGFFSFVVCYKHGPLADDRSRSLLMWMLRLLSL
VLVYAGVAVPQFAYAAIILLMSSWSLHYPLRACSYMRWKMEQWFTSKELVVKYLTEDEYREQADAETNSA
LEELRRACRKPDFPSWLVVSRLHTPSKFADFVLGGSHLSPEEISLHEEQYGLGGAFLEEQLFNPSTA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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