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Report for CCDS2242.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2242.2 Public Homo sapiens 2 METTL8 24 110 108 CCDS HistoryNCBI Gene:79828Re-query CCDS DB by CCDS ID:2242.2Re-query CCDS DB by GeneID:79828See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 2242.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000375258.9 ENSP00000364407.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000375258.9Link to Ensembl Protein Viewer:ENSP00000364407.4Re-query CCDS DB by Nucleotide ID:ENST00000375258Re-query CCDS DB by Protein ID:ENSP00000364407
Original member Current member EBI ENST00000612742.5 ENSP00000480056.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000612742.5Link to Ensembl Protein Viewer:ENSP00000480056.1Re-query CCDS DB by Nucleotide ID:ENST00000612742Re-query CCDS DB by Protein ID:ENSP00000480056
Original member Current member NCBI NM_001321154.2 NP_001308083.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321154.2Link to Protein Sequence:NP_001308083.1Re-query CCDS DB by Nucleotide ID:NM_001321154Re-query CCDS DB by Protein ID:NP_001308083Link to BLAST:NP_001308083.1
Original member Current member NCBI NM_001321155.2 NP_001308084.1 Accepted alive Link to Nucleotide Sequence:NM_001321155.2Link to Protein Sequence:NP_001308084.1Re-query CCDS DB by Nucleotide ID:NM_001321155Re-query CCDS DB by Protein ID:NP_001308084Link to BLAST:NP_001308084.1
Original member Current member NCBI NM_001321156.2 NP_001308085.1 Accepted alive Link to Nucleotide Sequence:NM_001321156.2Link to Protein Sequence:NP_001308085.1Re-query CCDS DB by Nucleotide ID:NM_001321156Re-query CCDS DB by Protein ID:NP_001308085Link to BLAST:NP_001308085.1
Original member Current member NCBI NM_024770.5 NP_079046.2 Accepted alive Link to Nucleotide Sequence:NM_024770.5Link to Protein Sequence:NP_079046.2Re-query CCDS DB by Nucleotide ID:NM_024770Re-query CCDS DB by Protein ID:NP_079046Link to BLAST:NP_079046.2

Chromosomal Locations for CCDS 2242.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 171324172 171324362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171325841 171325906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171326042 171326148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171330559 171330698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171331804 171331867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171337453 171337502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171339184 171339554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171360422 171360513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 171392043 171392185 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGAATATGATTTGGAGAAATTCCATTTCTTGTCTAAGGCTAGGAAAGGTGCCACACAGATACCAAAGTG
GTTACCACCCAGTGGCCCCTCTGGGATCAAGGATTTTAACTGACCCAGCCAAAGTTTTTGAACACAACAT
GTGGGATCACATGCAGTGGTCTAAGGAAGAAGAAGCAGCAGCCAGAAAAAAAGTAAAAGAAAACTCAGCT
GTGCGAGTCCTTCTGGAAGAGCAAGTTAAGTATGAGAGAGAAGCTAGTAAATACTGGGACACATTTTACA
AGATTCATAAGAATAAGTTTTTCAAGGATCGTAATTGGCTGTTGAGGGAATTTCCTGAAATTCTTCCAGT
TGATCAAAAACCTGAAGAGAAGGCGAGAGAATCATCATGGGATCATGTAAAAACTAGTGCTACAAATCGT
TTCTCAAGAATGCACTGTCCTACTGTGCCTGATGAAAAAAATCATTATGAGAAAAGTTCTGGTTCTTCAG
AAGGTCAAAGCAAAACAGAATCTGATTTTTCCAACCTAGACTCTGAAAAACACAAAAAAGGACCTATGGA
GACTGGATTGTTTCCTGGTAGCAATGCCACTTTCAGGATACTAGAGGTTGGTTGTGGAGCTGGAAATAGT
GTGTTTCCAATTTTGAACACTTTGGAGAACTCTCCGGAGTCCTTTCTGTATTGTTGTGATTTTGCTTCTG
GAGCTGTGGAGCTCGTAAAGTCACACTCGTCCTACAGAGCAACCCAGTGTTTTGCCTTTGTTCATGATGT
ATGTGATGATGGCTTACCTTACCCTTTTCCAGATGGGATCCTGGATGTCATTCTCCTTGTCTTTGTGCTC
TCTTCTATTCATCCTGACAGGATGCAAGGTGTTGTAAACCGACTGTCCAAGTTACTGAAACCTGGGGGAA
TGCTGTTATTTCGAGACTATGGAAGATATGATAAGACTCAGCTTCGTTTTAAAAAGGGACATTGTTTATC
TGAAAATTTTTATGTTCGAGGAGATGGTACCAGAGCATATTTCTTTACAAAAGGGGAAGTCCACAGTATG
TTCTGCAAAGCCAGTTTAGATGAAAAGCAAAATCTGGTTGATCGCCGCTTACAAGTTAATAGGAAAAAAC
AAGTGAAAATGCACCGAGTGTGGATTCAAGGCAAATTCCAGAAACCATTGCACCAGACTCAGAATAGCTC
CAATATGGTATCTACACTCCTTTCACAAGACTGA

Translation (407 aa):
MNMIWRNSISCLRLGKVPHRYQSGYHPVAPLGSRILTDPAKVFEHNMWDHMQWSKEEEAAARKKVKENSA
VRVLLEEQVKYEREASKYWDTFYKIHKNKFFKDRNWLLREFPEILPVDQKPEEKARESSWDHVKTSATNR
FSRMHCPTVPDEKNHYEKSSGSSEGQSKTESDFSNLDSEKHKKGPMETGLFPGSNATFRILEVGCGAGNS
VFPILNTLENSPESFLYCCDFASGAVELVKSHSSYRATQCFAFVHDVCDDGLPYPFPDGILDVILLVFVL
SSIHPDRMQGVVNRLSKLLKPGGMLLFRDYGRYDKTQLRFKKGHCLSENFYVRGDGTRAYFFTKGEVHSM
FCKASLDEKQNLVDRRLQVNRKKQVKMHRVWIQGKFQKPLHQTQNSSNMVSTLLSQD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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